RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 BTCP35070 178 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 PBX2P40425 430 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 ACAA2P42765 397 aaKnown RBP10.88□□□□□ -0.67
CD44-209ENST00000433892 PSG6Q00889 435 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 MRPL28Q13084 256 aaKnown RBP10.88□□□□□ -0.67
CD44-209ENST00000433892 KIAA1324Q6UXG2 1013 aaKnown RBP10.88□□□□□ -0.67
CD44-209ENST00000433892 BMPERQ8N8U9 685 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 FAM98AQ8NCA5 519 aaKnown RBP10.88□□□□□ -0.67
CD44-209ENST00000433892 C7orf57Q8NEG2 295 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 TWSG1Q9GZX9 223 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 FOLH1BQ9HBA9 442 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 DNAJB12Q9NXW2 375 aaKnown RBP10.88□□□□□ -0.67
CD44-209ENST00000433892 ST6GALNAC2Q9UJ37 374 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 MRPS7Q9Y2R9 242 aaKnown RBP10.88□□□□□ -0.67
CD44-209ENST00000433892 YBX2Q9Y2T7 364 aaKnown RBP10.88□□□□□ -0.67
CD44-209ENST00000433892 CACNG2Q9Y698 323 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 LRRN3E7EW58 273 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 OR2B3O76000 313 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 ALX3O95076 343 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 TFP02787 698 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 CD3GP09693 182 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 SNRPBP14678 240 aaKnown RBP10.87□□□□□ -0.67
CD44-209ENST00000433892 HIST1H1CP16403 213 aaKnown RBP10.87□□□□□ -0.67
CD44-209ENST00000433892 HNRNPA2B1P22626 353 aaKnown RBP10.87□□□□□ -0.67
CD44-209ENST00000433892 NAA10P41227 235 aaPredicted RBP10.87□□□□□ -0.67
CD44-209ENST00000433892 HTR2BP41595 481 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 NTRK2Q16620 822 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 DEFB110Q30KQ9 67 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 C9orf50Q5SZB4 431 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 BICRALQ6AI39 1079 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 LAMTOR1Q6IAA8 161 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 PLCZ1Q86YW0 608 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 LRRC17Q8N6Y2 441 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 ZNF655Q8N720 491 aaPredicted RBP10.87□□□□□ -0.67
CD44-209ENST00000433892 FRMD1Q8N878 549 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 OR4D9Q8NGE8 314 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 OR9A4Q8NGU2 314 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 ASB12Q8WXK4 309 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 HSD17B8Q92506 261 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 MRGPRX1Q96LB2 322 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 ZFP3Q96NJ6 502 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 ZNF426Q9BUY5 554 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 PBX4Q9BYU1 374 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 LRRN3Q9H3W5 708 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 NUDT15Q9NV35 164 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 HAO2Q9NYQ3 351 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 CPNE7Q9UBL6 633 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 FBXL21Q9UKT6 434 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 HSPB11Q9Y547 144 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 HRKO00198 91 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 IFNGP01579 166 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 ATF1P18846 271 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 ACTC1P68032 377 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 ACTA1P68133 377 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 GPLD1P80108 840 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 FAM53BQ14153 422 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 FCN2Q15485 313 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 SLC36A2Q495M3 483 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 FAM205BPQ63HN1 556 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 PYHIN1Q6K0P9 492 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 ARHGAP11AQ6P4F7 1023 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 ESPNLQ6ZVH7 1005 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 MS4A15Q8N5U1 240 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 SLC2A12Q8TD20 617 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 THAP4Q8WY91 577 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 PHF21AQ96BD5 680 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 PELI1Q96FA3 418 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 CCDC3Q9BQI4 270 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 GTPBP2Q9BX10 602 aaKnown RBP10.87□□□□□ -0.67
CD44-209ENST00000433892 TCEAL2Q9H3H9 227 aaPredicted RBP10.87□□□□□ -0.67
CD44-209ENST00000433892 BAIAP2Q9UQB8 552 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 ADAM18Q9Y3Q7 739 aa10.87□□□□□ -0.67
CD44-209ENST00000433892 CEP290O15078 2479 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 ERVH48-1M5A8F1 160 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 SDHBP21912 280 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 BTG1P62324 171 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 ILF3Q12906 894 aaKnown RBP eCLIP10.86□□□□□ -0.67
CD44-209ENST00000433892 NNATQ16517 81 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 NDUFAF6Q330K2 333 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 GXYLT1Q4G148 440 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 ZNF542PQ5EBM4 170 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 KIRREL2Q6UWL6 708 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 LYPD4Q6UWN0 246 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 LYPD8Q6UX82 237 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 Q6ZSR6 202 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 RNF44Q7L0R7 432 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 RSC1A1Q92681 617 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 PMM1Q92871 262 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 SNAPC3Q92966 411 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 TRIM2Q9C040 744 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 BRD7Q9NPI1 651 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 POLE3Q9NRF9 147 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 DTX4Q9Y2E6 619 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 IER3IP1Q9Y5U9 82 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 A0A0J9YY10 115 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 MCIDASD6RGH6 385 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 IMPA2O14732 288 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 TNFRSF10CO14798 259 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 FABP7O15540 132 aa10.86□□□□□ -0.67
CD44-209ENST00000433892 CDC123O75794 336 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms