RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 ERVPABLB-1P60509 514 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 ASPHQ12797 758 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 TIGITQ495A1 244 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 CFAP221Q4G0U5 840 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 SFT2D3Q587I9 215 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 WSCD1Q658N2 575 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 OR4F3Q6IEY1 312 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 FAM199XQ6PEV8 388 aaPredicted RBP4.56□□□□□ -1.68
USP54-206ENST00000433394 FRA10AC1Q70Z53 315 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 GDPD3Q7L5L3 318 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 KLHL30-AS1Q8NEE0 82 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 CXorf40BQ96DE9 158 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 SERAC1Q96JX3 654 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 IFT74Q96LB3 600 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 CNPY3Q9BT09 278 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 NMUR2Q9GZQ4 415 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 MCCC2Q9HCC0 563 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 POLE4Q9NR33 117 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 RIMS3Q9UJD0 308 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 EPRSP07814 1512 aaKnown RBP4.56□□□□□ -1.68
USP54-206ENST00000433394 LRRC9Q6ZRR7 1453 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 SUPT6HQ7KZ85 1726 aaKnown RBP4.55□□□□□ -1.68
USP54-206ENST00000433394 IGLV8-61A0A075B6I0 122 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 HELTA6NFD8 242 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 RGS16O15492 202 aaPredicted RBP4.55□□□□□ -1.68
USP54-206ENST00000433394 CRLF1O75462 422 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 DIRAS1O95057 198 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 CLDN9O95484 217 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 COX5AP20674 150 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 PBLDP30039 288 aaPredicted RBP4.55□□□□□ -1.68
USP54-206ENST00000433394 IL2RGP31785 369 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 LEPP41159 167 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 KIR2DS2P43631 304 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 CASP4P49662 377 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 PKNOX1P55347 436 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 ACTR3P61158 418 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 CCDC173Q0VFZ6 552 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 ELAVL3Q14576 367 aaKnown RBP4.55□□□□□ -1.68
USP54-206ENST00000433394 KCTD21Q4G0X4 260 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 TCTEX1D4Q5JR98 221 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 CCDC183Q5T5S1 534 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 TFAP2EQ6VUC0 442 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 TRPM8Q7Z2W7 1104 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 MYPOPQ86VE0 399 aaPredicted RBP4.55□□□□□ -1.68
USP54-206ENST00000433394 ZNF525Q8N782 197 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 FAM83FQ8NEG4 500 aaPredicted RBP4.55□□□□□ -1.68
USP54-206ENST00000433394 OR2A12Q8NGT7 310 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 FOXN4Q96NZ1 517 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 PAXXQ9BUH6 204 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 PARD6BQ9BYG5 372 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 GLIPR2Q9H4G4 154 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 AZI2Q9H6S1 392 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 POPDC2Q9HBU9 364 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 DCDC2Q9UHG0 476 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 ADAM28Q9UKQ2 775 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 MEMO1Q9Y316 297 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 NPTNQ9Y639 398 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 UACAQ9BZF9 1416 aa4.55□□□□□ -1.68
USP54-206ENST00000433394 MTUS2Q5JR59 1369 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 IGKV3D-20A0A0C4DH25 116 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 IQANK1A0A1B0GTG1 560 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 A8MXQ7 604 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 TIMM8AO60220 97 aaPredicted RBP4.54□□□□□ -1.68
USP54-206ENST00000433394 FCMRO60667 390 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 PFKFB2O60825 505 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 ZNF254O75437 659 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 ATP5LO75964 103 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 CAPN1P07384 714 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 POLR2EP19388 210 aaKnown RBP4.54□□□□□ -1.68
USP54-206ENST00000433394 ZP3P21754 424 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 UGT1A5P35504 534 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 LIM2P55344 173 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 TMEM52BQ4KMG9 183 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 SBK1Q52WX2 424 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 OR2B11Q5JQS5 317 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 SAMD4BQ5PRF9 694 aaKnown RBP4.54□□□□□ -1.68
USP54-206ENST00000433394 SLC25A30Q5SVS4 291 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 HSDL2Q6YN16 418 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 GPR65Q8IYL9 337 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 MFSD9Q8NBP5 474 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 FAF2Q96CS3 445 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 RANBP9Q96S59 729 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 CCNL2Q96S94 520 aaPredicted RBP4.54□□□□□ -1.68
USP54-206ENST00000433394 MCHR1Q99705 422 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 C19orf24Q9BVV8 132 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 MAGT1Q9H0U3 335 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 SIGLEC8Q9NYZ4 499 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 SUN2Q9UH99 717 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 POLDIP2Q9Y2S7 368 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 ABCC2Q92887 1545 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 NUP153P49790 1475 aaKnown RBP4.54□□□□□ -1.68
USP54-206ENST00000433394 ADCY10Q96PN6 1610 aa4.54□□□□□ -1.68
USP54-206ENST00000433394 IGHV7-81A0A0B4J1V7 117 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 A0A0U1RQS6 177 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 A0A1B0GWB2 263 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 FAM47DPA6NHR8 397 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 SNTNA6NMZ2 147 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 SRRM5B3KS81 715 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 IDSB3KWA1 339 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 K7ENP7 123 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms