RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 TRAPPC4Q9Y296 219 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 GPRIN2O60269 458 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 DPM1O60762 260 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 IFNGR1P15260 489 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 C19orf57Q0VDD7 668 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 STEAP1BQ6NZ63 245 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 DLEU7Q6UYE1 221 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 SH2D5Q6ZV89 423 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 NDUFAF7Q7L592 441 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 KLHDC8BQ8IXV7 354 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 GATSQ8NAP1 163 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 TMED6Q8WW62 240 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 TMEM68Q96MH6 324 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 PIGQQ9BRB3 760 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 KATNB1Q9BVA0 655 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 BRF2Q9HAW0 419 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 NRIP3Q9NQ35 241 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 ACSS1Q9NUB1 689 aaPredicted RBP9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 POMT2Q9UKY4 750 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 TMEM235A6NFC5 223 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 SOCS7O14512 581 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 HCRTR2O43614 444 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 GNB3P16520 340 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 RPL17P18621 184 aaKnown RBP9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 RNF4P78317 190 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 DGCR2P98153 550 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 RPL22L1Q6P5R6 122 aaKnown RBP9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 RDH10Q8IZV5 341 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 TMEM239Q8WW34 195 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 DNAJA3Q96EY1 480 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 HHIPL1Q96JK4 782 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 PRRG4Q9BZD6 226 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 ACTL8Q9H568 366 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 UGDHO60701 494 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 SOCS5O75159 536 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 PIPP12273 146 aaPredicted RBP9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 RAB4AP20338 218 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 HBA1P69905 142 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 ARL6IP1Q15041 203 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 ZNF574Q6ZN55 896 aaPredicted RBP9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 USP51Q70EK9 711 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 OR13C9Q8NGT0 318 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 IER3IP1Q9Y5U9 82 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 NPFFR2Q9Y5X5 522 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 NUP98P52948 1817 aa9.76□□□□□ -0.85
PKNOX1-203ENST00000432907 CPED1A4D0V7 1026 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 KIAA0355O15063 1070 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 USP2O75604 605 aaPredicted RBP9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 RGS11O94810 467 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 SERPINA7P05543 415 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 ASGR2P07307 311 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 SNRPGP62308 76 aaKnown RBP9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 TLE3Q04726 772 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 PSRC1Q6PGN9 363 aaPredicted RBP9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 EID2Q8N6I1 236 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 SUSD3Q96L08 255 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 ZNF559Q9BR84 538 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 SUCNR1Q9BXA5 334 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 HCAR1Q9BXC0 346 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 ZNF281Q9Y2X9 895 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 TMEM150CB9EJG8 249 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 B4GALT3O60512 393 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 CTRB1P17538 263 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 ARRB2P32121 409 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 HYAL2Q12891 473 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 TSPAN31Q12999 210 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 TNK1Q13470 666 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 CTRB2Q6GPI1 263 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 SLC16A12Q6ZSM3 486 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 CCDC71LQ8N9Z2 235 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 OR6S1Q8NH40 331 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 SPACA1Q9HBV2 294 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 PNO1Q9NRX1 252 aaKnown RBP9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 SERINC1Q9NRX5 453 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 GAB2Q9UQC2 676 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 PCDHGA5Q9Y5G8 931 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 MYH9P35579 1960 aaKnown RBP9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 OR2T1O43869 369 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 FKTNO75072 461 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 CSF2RBP32927 897 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 WASP42768 502 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 CTXN1P60606 82 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 SULF2Q8IWU5 870 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 LRRC25Q8N386 305 aaPredicted RBP9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 OR5M8Q8NGP6 311 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 OR14C36Q8NHC7 312 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 RNF170Q96K19 258 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 IL17FQ96PD4 163 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 ZNF251Q9BRH9 671 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 NMNAT2Q9BZQ4 307 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 OPA3Q9H6K4 179 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 ISYNA1Q9NPH2 558 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 A8MXE2 369 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 CBX7O95931 251 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 ITGB2P05107 769 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 SERPINA5P05154 406 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 RAD52P43351 418 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 CLINT1Q14677 625 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 ETFRF1Q6IPR1 90 aa9.75□□□□□ -0.85
PKNOX1-203ENST00000432907 LPCAT3Q6P1A2 487 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms