RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 TRAPPC4Q9Y296 219 aa11.79□□□□□ -0.52
DDX56-204ENST00000431640 DTX4Q9Y2E6 619 aa11.79□□□□□ -0.52
DDX56-204ENST00000431640 TMEM184BQ9Y519 407 aaPredicted RBP11.79□□□□□ -0.52
DDX56-204ENST00000431640 PCDHGB6Q9Y5F9 930 aa11.79□□□□□ -0.52
DDX56-204ENST00000431640 COL5A1P20908 1838 aaPredicted RBP11.79□□□□□ -0.52
DDX56-204ENST00000431640 SLC35F4A4IF30 521 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 CTDSP2O14595 271 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 YKT6O15498 198 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 GDF9O60383 454 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 NDUFB2O95178 105 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 APOL3O95236 402 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 CLPSP04118 112 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 PNMTP11086 282 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 CD53P19397 219 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 NOS3P29474 1203 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 CSF2RBP32927 897 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 TNFSF8P32971 234 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 PSMD7P51665 324 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 SLC37A1P57057 533 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 CFHR1Q03591 330 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 CRYZQ08257 329 aaKnown RBP11.78□□□□□ -0.52
DDX56-204ENST00000431640 SLC35F1Q5T1Q4 408 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 C22orf42Q6IC83 251 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 WBP2NLQ6ICG8 309 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 WDR74Q6RFH5 385 aaPredicted RBP11.78□□□□□ -0.52
DDX56-204ENST00000431640 ZNF322Q6U7Q0 402 aaPredicted RBP11.78□□□□□ -0.52
DDX56-204ENST00000431640 SHFQ7M4L6 423 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 PRSS42Q7Z5A4 293 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 SLC22A16Q86VW1 577 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 METTL27Q8N6F8 245 aaPredicted RBP11.78□□□□□ -0.52
DDX56-204ENST00000431640 OR51G2Q8NGK0 314 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 OR4C3Q8NH37 302 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 OR51A7Q8NH64 312 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 SPRYD4Q8WW59 207 aaPredicted RBP11.78□□□□□ -0.52
DDX56-204ENST00000431640 PTP4A1Q93096 173 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 SLC41A2Q96JW4 573 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 WDFY2Q96P53 400 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 PRRX2Q99811 253 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 EDEM2Q9BV94 578 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 ENKD1Q9H0I2 346 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 ZNF304Q9HCX3 659 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 EXOSC3Q9NQT5 275 aaKnown RBP11.78□□□□□ -0.52
DDX56-204ENST00000431640 BABAM2Q9NXR7 383 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 QPCTLQ9NXS2 382 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 CLCA3PQ9Y6N3 262 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 MAU2Q9Y6X3 613 aa11.78□□□□□ -0.52
DDX56-204ENST00000431640 DAPL1A0PJW8 107 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 FRG2CA6NGY1 282 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 FAM183AA6NL82 134 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 SCDO00767 359 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 TOX3O15405 576 aaPredicted RBP11.77□□□□□ -0.53
DDX56-204ENST00000431640 RGS5O15539 181 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 TBX1O43435 398 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 IDH3BO43837 385 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 RFPL3O75679 317 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 CD59P13987 128 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 FUT1P19526 365 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 SEPHS1P49903 392 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 RPS25P62851 125 aaKnown RBP11.77□□□□□ -0.53
DDX56-204ENST00000431640 ACTC1P68032 377 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 ACTA1P68133 377 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 GALEQ14376 348 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 TRAM1Q15629 374 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 ELAVL1Q15717 326 aaKnown RBP11.77□□□□□ -0.53
DDX56-204ENST00000431640 KIRREL2Q6UWL6 708 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 THSD4Q6ZMP0 1018 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 DBX2Q6ZNG2 339 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 TMPRSS9Q7Z410 1059 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 GPALPP1Q8IXQ4 340 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 SNRNP27Q8WVK2 155 aaKnown RBP11.77□□□□□ -0.53
DDX56-204ENST00000431640 DAZLQ92904 295 aaKnown RBP11.77□□□□□ -0.53
DDX56-204ENST00000431640 TMEM203Q969S6 136 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 CCDC74AQ96AQ1 378 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 TRMT61AQ96FX7 289 aaKnown RBP11.77□□□□□ -0.53
DDX56-204ENST00000431640 LCORQ96JN0 433 aaPredicted RBP11.77□□□□□ -0.53
DDX56-204ENST00000431640 BARHL1Q9BZE3 327 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 POLHQ9Y253 713 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 CMAHPQ9Y471 501 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 MN1Q10571 1320 aaPredicted RBP11.77□□□□□ -0.53
DDX56-204ENST00000431640 ASXL3Q9C0F0 2248 aa11.77□□□□□ -0.53
DDX56-204ENST00000431640 TRAV27A0A087WT01 109 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 IGKV3D-11A0A0A0MRZ8 115 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 OR2W5A6NFC9 320 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 C12orf71A8MTZ7 269 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 PTTG1O95997 202 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 ZNF883P0CG24 379 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 CELP19835 753 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 PTNP21246 168 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 FBLP22087 321 aaKnown RBP11.76□□□□□ -0.53
DDX56-204ENST00000431640 CFL1P23528 166 aaKnown RBP11.76□□□□□ -0.53
DDX56-204ENST00000431640 OR1D4P47884 311 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 TAS2R43P59537 309 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 PRPS1P60891 318 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 RPS7P62081 194 aaKnown RBP11.76□□□□□ -0.53
DDX56-204ENST00000431640 PSPHP78330 225 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 KCNAB1Q14722 419 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 ISXQ2M1V0 245 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 KLHL12Q53G59 568 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 DPY19L2P2Q6ZN68 376 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 PRR23CQ6ZRP0 262 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms