RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 MCHR1Q99705 422 aa12.9□□□□□ -0.34
LAMA4-208ENST00000431543 BDH2Q9BUT1 245 aa12.9□□□□□ -0.34
LAMA4-208ENST00000431543 DCLRE1BQ9H816 532 aa12.9□□□□□ -0.34
LAMA4-208ENST00000431543 RNF6Q9Y252 685 aa12.9□□□□□ -0.34
LAMA4-208ENST00000431543 RPH3AQ9Y2J0 694 aaPredicted RBP12.9□□□□□ -0.34
LAMA4-208ENST00000431543 ENPP4Q9Y6X5 453 aa12.9□□□□□ -0.34
LAMA4-208ENST00000431543 FIGNL2A6NMB9 653 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 TMEM229AB2RXF0 380 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 PRSS44E7EML9 344 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 hCG_2039718K7EN88 272 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 WDR1O75083 606 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 DEAF1O75398 565 aaPredicted RBP12.89□□□□□ -0.35
LAMA4-208ENST00000431543 KRT36O76013 467 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 CST1P01037 141 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 GKN3PP0CG01 181 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 SRD5A2P31213 254 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 ZNF41P51814 821 aaPredicted RBP12.89□□□□□ -0.35
LAMA4-208ENST00000431543 ARHGDIAP52565 204 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 GFRA1P56159 465 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 B3GALT5-AS1P59052 145 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 ZNF117Q03924 483 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 NHSL2Q5HYW2 709 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 C1orf185Q5T7R7 199 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 SP5Q6BEB4 398 aaPredicted RBP12.89□□□□□ -0.35
LAMA4-208ENST00000431543 TMEM211Q6ICI0 200 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 PLXDC2Q6UX71 529 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 B3GNT6Q6ZMB0 384 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 SEM1Q6ZVN7 128 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 FAM71CQ8NEG0 241 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 OR6T1Q8NGN1 323 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 OR5M1Q8NGP8 315 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 TMEM234Q8WY98 164 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 RND1Q92730 232 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 ZNF300Q96RE9 604 aaPredicted RBP12.89□□□□□ -0.35
LAMA4-208ENST00000431543 PIP5K1AQ99755 562 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 FNDC11Q9BVV2 318 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 AMBRA1Q9C0C7 1298 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 DKKL1Q9UK85 242 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 CAMK2AQ9UQM7 478 aa12.89□□□□□ -0.35
LAMA4-208ENST00000431543 PHF3Q92576 2039 aaKnown RBP12.89□□□□□ -0.35
LAMA4-208ENST00000431543 A0A087WZY1 265 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 IGLV3-32A0A0A0MS00 114 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 C19orf84I3L1E1 186 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 FAAHO00519 579 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 ADAMDEC1O15204 470 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 CLOCKO15516 846 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 OIP5O43482 229 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 TOXO94900 526 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 SEMG1P04279 462 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 THRBP10828 461 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 HK1P19367 917 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 TNFRSF1BP20333 461 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 AGAP20933 346 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 MAGEA2P43356 314 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 HTR3AP46098 478 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 DSCR4P56555 118 aaPredicted RBP12.88□□□□□ -0.35
LAMA4-208ENST00000431543 SRYQ05066 204 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 ST3GAL3Q11203 375 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 EPS8Q12929 822 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 SKP2Q13309 424 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 RIPK1Q13546 671 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 GK3PQ14409 553 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 WBP2NLQ6ICG8 309 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 ARSKQ6UWY0 536 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 PLEKHM3Q6ZWE6 761 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 CADM2Q8N3J6 435 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 LSMEM1Q8N8F7 131 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 PIK3C3Q8NEB9 887 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 RNF217Q8TC41 542 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 DNAJA4Q8WW22 397 aaPredicted RBP12.88□□□□□ -0.35
LAMA4-208ENST00000431543 SLCO4A1Q96BD0 722 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 ARSGQ96EG1 525 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 C7orf34Q96L11 122 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 NPAS1Q99742 590 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 UCK2Q9BZX2 261 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 PRDM14Q9GZV8 571 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 REEP1Q9H902 201 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 NDUFAF4Q9P032 175 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 DNAJB9Q9UBS3 223 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 ICAM5Q9UMF0 924 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 MRPS18CQ9Y3D5 142 aaKnown RBP12.88□□□□□ -0.35
LAMA4-208ENST00000431543 CHST2Q9Y4C5 530 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 KIAA1549Q9HCM3 1950 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 NBPF19A0A087WUL8 3843 aa12.88□□□□□ -0.35
LAMA4-208ENST00000431543 A0A0G2JNJ9 132 aa12.87□□□□□ -0.35
LAMA4-208ENST00000431543 TRAPPC13A5PLN9 417 aa12.87□□□□□ -0.35
LAMA4-208ENST00000431543 AHRRA9YTQ3 701 aa12.87□□□□□ -0.35
LAMA4-208ENST00000431543 SHISA8B8ZZ34 492 aa12.87□□□□□ -0.35
LAMA4-208ENST00000431543 FRS3O43559 492 aa12.87□□□□□ -0.35
LAMA4-208ENST00000431543 TIPRLO75663 272 aa12.87□□□□□ -0.35
LAMA4-208ENST00000431543 OR5F1O95221 314 aa12.87□□□□□ -0.35
LAMA4-208ENST00000431543 CLDN14O95500 239 aa12.87□□□□□ -0.35
LAMA4-208ENST00000431543 EPPINO95925 133 aa12.87□□□□□ -0.35
LAMA4-208ENST00000431543 ACTL6AO96019 429 aa12.87□□□□□ -0.35
LAMA4-208ENST00000431543 GABRA1P14867 456 aa12.87□□□□□ -0.35
LAMA4-208ENST00000431543 SLC1A3P43003 542 aa12.87□□□□□ -0.35
LAMA4-208ENST00000431543 YAP1P46937 504 aaKnown RBP12.87□□□□□ -0.35
LAMA4-208ENST00000431543 IDH2P48735 452 aaKnown RBP12.87□□□□□ -0.35
LAMA4-208ENST00000431543 LHX2P50458 406 aa12.87□□□□□ -0.35
LAMA4-208ENST00000431543 VLDLRP98155 873 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms