RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 CYBBP04839 570 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 MMP7P09237 267 aaPredicted RBP4.98□□□□□ -1.61
PTPN4-203ENST00000430976 SLC2A4P14672 509 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 KCNE1P15382 129 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 BPIP17213 487 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 BMP7P18075 431 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 OR1D2P34982 312 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 AQP5P55064 265 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 TMEM33P57088 247 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 EEFSECP57772 596 aaKnown RBP4.98□□□□□ -1.61
PTPN4-203ENST00000430976 DNAJB13P59910 316 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 UFM1P61960 85 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ELAVL2Q12926 359 aaKnown RBP4.98□□□□□ -1.61
PTPN4-203ENST00000430976 SLAMF1Q13291 335 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 RAB41Q5JT25 222 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ELFN2Q5R3F8 820 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 LIPKQ5VXJ0 399 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ZNF770Q6IQ21 691 aaPredicted RBP4.98□□□□□ -1.61
PTPN4-203ENST00000430976 DOK6Q6PKX4 331 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 TMEM205Q6UW68 189 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ENPP7Q6UWV6 458 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 G2E3Q7L622 706 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 VN1R5Q7Z5H4 357 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ZNF567Q8N184 647 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 C2orf73Q8N5S3 287 aaPredicted RBP4.98□□□□□ -1.61
PTPN4-203ENST00000430976 SLC44A5Q8NCS7 719 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 OR4M2Q8NGB6 313 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 THAP4Q8WY91 577 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 TSSK3Q96PN8 268 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 CNN2Q99439 309 aaKnown RBP4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ZNF426Q9BUY5 554 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ANKRD60Q9BZ19 345 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 TMEM27Q9HBJ8 222 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 CRLS1Q9UJA2 301 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 POMPQ9Y244 141 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 MRPS18BQ9Y676 258 aaKnown RBP4.98□□□□□ -1.61
PTPN4-203ENST00000430976 SALL1Q9NSC2 1324 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 FAM240BA0A1B0GVZ2 78 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ATP6AP2A0A1C7CYW4 349 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 WIPF3A6NGB9 483 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 OR5H14A6NHG9 310 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 TMEM189-UBE2V1I3L0A0 370 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 HAS3O00219 553 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 TP53I11O14683 189 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 INHAP05111 366 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 BMP4P12644 408 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 PSMB9P28065 219 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 PRDX5P30044 214 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 CHRNB4P30926 498 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 CA5AP35218 305 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 MAGEA5P43359 124 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 PTH2RP49190 550 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 NUDT2P50583 147 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 PNLIPRP1P54315 467 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 EMP1P54849 157 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 LSM11P83369 360 aaKnown RBP eCLIP4.98□□□□□ -1.61
PTPN4-203ENST00000430976 TPBGQ13641 420 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 APOFQ13790 326 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 TTLL4Q14679 1199 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 TAF9Q16594 264 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 XKR7Q5GH72 579 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 COL5A1-AS1Q5SY13 56 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 IDNKQ5T6J7 187 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 CYP2R1Q6VVX0 501 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 LYSMD2Q8IV50 215 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ABRAQ8N0Z2 381 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 LRRC75AQ8NAA5 344 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 OR2Z1Q8NG97 314 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 OR10R2Q8NGX6 335 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ISOC2Q96AB3 205 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 FAM131CQ96AQ9 280 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 RPUSD4Q96CM3 377 aaKnown RBP4.98□□□□□ -1.61
PTPN4-203ENST00000430976 TMEM176AQ96HP8 235 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ST6GAL2Q96JF0 529 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 TMEM56Q96MV1 263 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 JMJD8Q96S16 334 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 WDR83Q9BRX9 315 aaKnown RBP4.98□□□□□ -1.61
PTPN4-203ENST00000430976 CNTNAP3Q9BZ76 1288 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 TM6SF1Q9BZW5 370 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 IL22Q9GZX6 179 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 TLE6Q9H808 572 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ZNRF3Q9ULT6 936 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 TMEM56-RWDD3S4R434 201 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 MYH2Q9UKX2 1941 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 KIAA0556O60303 1618 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ABCA9Q8IUA7 1624 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 MYH8P13535 1937 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ZNF587BE7ETH6 402 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ANHXE9PGG2 379 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 F8WDY8 70 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 AP4M1O00189 453 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 PLPP1O14494 284 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 OR7A17O14581 309 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ATP6AP2O75787 350 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 FAM155BO75949 473 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 MT-ND4P03905 459 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ALDOBP05062 364 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 FABP3P05413 133 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 FABP4P15090 132 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 HIST1H1BP16401 226 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms