RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 ACY3Q96HD9 319 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 MSLNLQ96KJ4 702 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 SPANXDQ9BXN6 97 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 ATG10Q9H0Y0 220 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 TMEM27Q9HBJ8 222 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 FBRSL1Q9HCM7 1045 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 CYSLTR2Q9NS75 346 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 TP53TG5Q9Y2B4 290 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 A0A0G2JLL6 359 aaPredicted RBP7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 ARL4DP49703 201 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 CCR6P51684 374 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 CDKN2DP55273 166 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 UBE2KP61086 200 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 GGTA1PQ4G0N0 100 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 PRRT2Q7Z6L0 340 aaPredicted RBP7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 GNPNAT1Q96EK6 184 aaPredicted RBP7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 ASB16Q96NS5 453 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 BARD1Q99728 777 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 MRPL17Q9NRX2 175 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 BRINP1O60477 761 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 CASP9P55211 416 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 NIPAL3Q6P499 406 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 LAX1Q8IWV1 398 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 OR4C5Q8NGB2 326 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 OR14A16Q8NHC5 309 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 ST8SIA2Q92186 375 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 PNPLA2Q96AD5 504 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 NSUN5Q96P11 429 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 SLC23A1Q9UHI7 598 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 EMCNQ9ULC0 261 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 SIP14410 1827 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 URADA6NGE7 173 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 OR2AG2A6NM03 316 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 SLC33A1O00400 549 aaPredicted RBP7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 NRP1O14786 923 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 USP2O75604 605 aaPredicted RBP7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 ZNF41P51814 821 aaPredicted RBP7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 CXADRP78310 365 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 TARBP2Q15633 366 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 C17orf64Q86WR6 236 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 FNDC9Q8TBE3 224 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 C12orf42Q96LP6 360 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 C2orf88Q9BSF0 95 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 OR8D2Q9GZM6 311 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 SCML2Q9UQR0 700 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 KMT2EQ8IZD2 1858 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 LRIT2A6NDA9 550 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 OR5H15A6NDH6 313 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 OR5H1A6NKK0 313 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 NUDT21O43809 227 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 PDYNP01213 254 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 PFKMP08237 780 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 MTHFD2P13995 350 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 PTPN6P29350 595 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 ABRAXAS2Q15018 415 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 C9orf135Q5VTT2 229 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 ENPP6Q6UWR7 440 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 USP50Q70EL3 339 aaPredicted RBP7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 OR6C75A6NL08 312 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 ERAL1O75616 437 aaKnown RBP7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 CCND3P30281 292 aaPredicted RBP7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 ZNF763Q0D2J5 394 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 RAB30Q15771 203 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 DEFB128Q7Z7B8 93 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 NAA40Q86UY6 237 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 MRGPRX2Q96LB1 330 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 PLEKHA2Q9HB19 425 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 SLC22A14Q9Y267 594 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 OARD1Q9Y530 152 aa7.06□□□□□ -1.28
SYNPO2-202ENST00000429713 SOX18P35713 384 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 MBTPS1Q14703 1052 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 ETFDHQ16134 617 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 NSUN5P2Q63ZY6 315 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 DHRS7BQ6IAN0 325 aaPredicted RBP7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 FRRS1Q6ZNA5 592 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 PHYKPLQ8IUZ5 450 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 ZNF433Q8N7K0 673 aaPredicted RBP7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 OR4E2Q8NGC2 313 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 OR8J2Q8NGG1 315 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 RELTQ969Z4 430 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 MYOZ1Q9NP98 299 aaPredicted RBP7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 IL26Q9NPH9 171 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 CD84Q9UIB8 345 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 CNOT1A5YKK6 2376 aaKnown RBP7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 ABHD14A-ACY1A0A1B0GW23 586 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 LAMP2P13473 410 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 CD1DP15813 335 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 TMEM11P17152 192 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 UGT8Q16880 541 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 FAHD1Q6P587 224 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 OPN5Q6U736 354 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 NKAIN3Q8N8D7 197 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 CCDC71LQ8N9Z2 235 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 FAM98AQ8NCA5 519 aaKnown RBP7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 MIR1-1HGQ9H1L0 117 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 SLC6A20Q9NP91 592 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 TRAV1-2A0A0B4J238 106 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 ARPC1BO15143 372 aaKnown RBP7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 MAFKO60675 156 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 HLA-AP01891 365 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms