RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 MEIOBQ8N635 442 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 MORN4Q8NDC4 146 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 C1orf216Q8TAB5 229 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 VOPP1Q96AW1 172 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 UPRTQ96BW1 309 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 SIPA1Q96FS4 1042 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 HSPA12BQ96MM6 686 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 OR2M4Q96R27 311 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 ZPBPQ9BS86 351 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 FOXQ1Q9C009 403 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 OR10A4Q9H209 315 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 SRA1Q9HD15 236 aaKnown RBP7.47□□□□□ -1.21
HPS4-205ENST00000429411 HRASLS2Q9NWW9 162 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 TDRD6O60522 2096 aaKnown RBP7.47□□□□□ -1.21
HPS4-205ENST00000429411 A0A0A6YYD5 115 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 CDHR4A6H8M9 788 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 EIF4EP06730 217 aaKnown RBP7.47□□□□□ -1.21
HPS4-205ENST00000429411 PTHLHP12272 177 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 HOXB2P14652 356 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 RAB3BP20337 219 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 F8A1P23610 371 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 PITPNBP48739 271 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 CDK5Q00535 292 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 SNTB2Q13425 540 aaKnown RBP7.47□□□□□ -1.21
HPS4-205ENST00000429411 GPR176Q14439 515 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 SLC25A35Q3KQZ1 300 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 EIPR1Q53HC9 387 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 ALG10BQ5I7T1 473 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 CLVS2Q5SYC1 327 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 GALNTL5Q7Z4T8 443 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 TAF8Q7Z7C8 310 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 SHISA5Q8N114 240 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 DEFB119Q8N690 84 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 SMRP1Q8NCR6 262 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 SMPDL3BQ92485 455 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 GHSRQ92847 366 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 WDR34Q96EX3 536 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 MS4A4EQ96PG1 132 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 FUZQ9BT04 418 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 PHF7Q9BWX1 381 aaPredicted RBP7.47□□□□□ -1.21
HPS4-205ENST00000429411 IL21RQ9HBE5 538 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 PRDM7Q9NQW5 492 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 SOHLH2Q9NX45 425 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 MAU2Q9Y6X3 613 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 TP53BP1Q12888 1972 aaPredicted RBP7.47□□□□□ -1.21
HPS4-205ENST00000429411 SPEGQ15772 3267 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 IGKV1-8A0A0C4DH67 115 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 TRDV1A0A1B0GX56 115 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 A0A1W2PPV9 198 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 TMEM129A0AVI4 362 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 SHISA3A0PJX4 238 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 GXYLT2A0PJZ3 443 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 MEIS3P1A6NDR6 274 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 CHURC1-FNTBB4DL54 471 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 SURF4O15260 269 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 FLRT2O43155 660 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 RDH16O75452 317 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 GATBO75879 557 aaKnown RBP7.47□□□□□ -1.21
HPS4-205ENST00000429411 THEGLP0DJG4 465 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 RPS27P42677 84 aaKnown RBP7.47□□□□□ -1.21
HPS4-205ENST00000429411 EVX1P49640 407 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 ARFIP1P53367 373 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 RPS21P63220 83 aaKnown RBP7.47□□□□□ -1.21
HPS4-205ENST00000429411 OC90Q02509 493 aaPredicted RBP7.47□□□□□ -1.21
HPS4-205ENST00000429411 FUT5Q11128 374 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 TPBGQ13641 420 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 MAPK14Q16539 360 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 DCST2Q5T1A1 773 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 ZNF776Q68DI1 518 aaPredicted RBP7.47□□□□□ -1.21
HPS4-205ENST00000429411 MFSD12Q6NUT3 480 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 ZNF620Q6ZNG0 422 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 ZNF619Q8N2I2 560 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 CNOT9Q92600 299 aaKnown RBP7.47□□□□□ -1.21
HPS4-205ENST00000429411 GAL3ST4Q96RP7 486 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 ATF6BQ99941 703 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 APOOQ9BUR5 198 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 RAB11FIP5Q9BXF6 653 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 C12orf10Q9HB07 376 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 IER3IP1Q9Y5U9 82 aa7.47□□□□□ -1.21
HPS4-205ENST00000429411 NOTCH4Q99466 2003 aa7.46□□□□□ -1.21
HPS4-205ENST00000429411 LANCL1O43813 399 aa7.46□□□□□ -1.21
HPS4-205ENST00000429411 SCO1O75880 301 aa7.46□□□□□ -1.21
HPS4-205ENST00000429411 HK1P19367 917 aa7.46□□□□□ -1.21
HPS4-205ENST00000429411 MAKP20794 623 aa7.46□□□□□ -1.21
HPS4-205ENST00000429411 ADH7P40394 386 aa7.46□□□□□ -1.21
HPS4-205ENST00000429411 RPS5P46782 204 aaKnown RBP7.46□□□□□ -1.21
HPS4-205ENST00000429411 GBX2P52951 348 aaPredicted RBP7.46□□□□□ -1.21
HPS4-205ENST00000429411 RRAS2P62070 204 aaPredicted RBP7.46□□□□□ -1.21
HPS4-205ENST00000429411 POU6F2P78424 691 aaPredicted RBP7.46□□□□□ -1.21
HPS4-205ENST00000429411 BNC1Q01954 994 aa7.46□□□□□ -1.21
HPS4-205ENST00000429411 TEKQ02763 1124 aa7.46□□□□□ -1.21
HPS4-205ENST00000429411 DPTQ07507 201 aa7.46□□□□□ -1.21
HPS4-205ENST00000429411 ILF3Q12906 894 aaKnown RBP eCLIP7.46□□□□□ -1.21
HPS4-205ENST00000429411 SF3A2Q15428 464 aaKnown RBP7.46□□□□□ -1.21
HPS4-205ENST00000429411 KIAA1211LQ6NV74 962 aa7.46□□□□□ -1.21
HPS4-205ENST00000429411 FAAP20Q6NZ36 180 aa7.46□□□□□ -1.21
HPS4-205ENST00000429411 SFXN4Q6P4A7 337 aa7.46□□□□□ -1.21
HPS4-205ENST00000429411 FIGLAQ6QHK4 219 aa7.46□□□□□ -1.21
HPS4-205ENST00000429411 MEPCEQ7L2J0 689 aaKnown RBP7.46□□□□□ -1.21
HPS4-205ENST00000429411 GID4Q8IVV7 300 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms