RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 LINC00301Q8NCQ3 95 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 ST6GALNAC3Q8NDV1 305 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 OR52K1Q8NGK4 314 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 CCL4L1Q8NHW4 92 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 ENKURQ8TC29 256 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 AGR3Q8TD06 166 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 OR1E3Q8WZA6 343 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 SHC3Q92529 594 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 SNRNP40Q96DI7 357 aaKnown RBP3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 PDXPQ96GD0 296 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 GDAP1L1Q96MZ0 367 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 ZNF641Q96N77 438 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 CIB1Q99828 191 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 ZYG11BQ9C0D3 744 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 WNT5BQ9H1J7 359 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 CARD9Q9H257 536 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 MED20Q9H944 212 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 NEK6Q9HC98 313 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 APMAPQ9HDC9 416 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 LHX9Q9NQ69 397 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 PHPT1Q9NRX4 125 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 ASF1BQ9NVP2 202 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 MRPL39Q9NYK5 338 aaKnown RBP3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 SENP1Q9P0U3 644 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 ATP6V1HQ9UI12 483 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 STAP1Q9ULZ2 295 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 FAM32AQ9Y421 112 aaKnown RBP3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 KLF2Q9Y5W3 355 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 PIKFYVEQ9Y2I7 2098 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 ANKHD1Q8IWZ3 2542 aaKnown RBP3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 SEC16AO15027 2179 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 LOC100509620A0A075B734 347 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 LOC102723996A0A087X1L8 192 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 ARGFXA6NJG6 315 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 OR5K4A6NMS3 321 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 BUB1O43683 1085 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 KDELR3O43731 214 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 KLRC4O43908 158 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 MGRN1O60291 552 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 CEACAM4O75871 244 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 CRYZL1O95825 349 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 CD160O95971 181 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 IGHV3-13P01766 116 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 IGHEP01854 428 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 ALPPP05187 535 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 PLEKP08567 350 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 GSTA2P09210 222 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 ANKRD34CP0C6C1 535 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 LINGO3P0C6S8 592 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 DNASE1P24855 282 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 KRTAP5-9P26371 169 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 PTPN4P29074 926 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 IFNA8P32881 189 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 MTIF2P46199 727 aaKnown RBP3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 KRT6CP48668 564 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 CDH13P55290 713 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 MAT1AQ00266 395 aaKnown RBP3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 RALGDSQ12967 914 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 PPA1Q15181 289 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 KLHL38Q2WGJ6 581 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 CBWD6Q4V339 395 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 ODF2Q5BJF6 829 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 FBXO48Q5FWF7 155 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 VWA2Q5GFL6 755 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 CBWD3Q5JTY5 395 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 LYPLAL1Q5VWZ2 237 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 PNCKQ6P2M8 343 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 RGS9BPQ6ZS82 235 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 C11orf57Q6ZUT1 292 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 FAM47EQ6ZV65 393 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 ADCK1Q86TW2 530 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 COMTD1Q86VU5 262 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 VSIG1Q86XK7 387 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 DNAAF5Q86Y56 855 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 ZNF565Q8N9K5 539 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 FDCSPQ8NFU4 85 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 OR7G1Q8NGA0 311 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 OR6K2Q8NGY2 324 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 GRK7Q8WTQ7 553 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 GATAD1Q8WUU5 269 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 LPGAT1Q92604 370 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 C11orf24Q96F05 449 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 PGAP3Q96FM1 320 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 PAGE5Q96GU1 130 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 RADILQ96JH8 1075 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 AGAP4Q96P64 663 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 SECISBP2Q96T21 854 aaKnown RBP3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 ERP44Q9BS26 406 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 CCDC28BQ9BUN5 200 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 MRPL1Q9BYD6 325 aaKnown RBP3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 FAM192AQ9GZU8 254 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 HAUS4Q9H6D7 363 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 CRLF2Q9HC73 371 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 PDE7BQ9NP56 450 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 PALMDQ9NP74 551 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 EQTNQ9NQ60 294 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 GPR83Q9NYM4 423 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 TMEM9Q9P0T7 183 aa3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 RCOR3Q9P2K3 495 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P5-201ENST00000428894 NFKBIL1Q9UBC1 381 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms