RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 RASSF1Q9NS23 344 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 SLC6A13Q9NSD5 602 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 EMC3Q9P0I2 261 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 VAPAQ9P0L0 249 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 PROCRQ9UNN8 238 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 GPR52Q9Y2T5 361 aa8.17□□□□□ -1.1
SMC1A-203ENST00000428014 CENPVL1A0A0U1RR11 272 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 HTR3EA5X5Y0 456 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 OR6C65A6NJZ3 312 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 A6NNC1 897 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 C17orf51A8MQB3 221 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 C16orf97H3BN30 126 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 NDUFAB1O14561 156 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 ANGPT2O15123 496 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 SEC14L5O43304 696 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 OIP5O43482 229 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 NPIPB7O75200 414 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 AQP8O94778 261 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 IGF2P01344 180 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 GSNP06396 782 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 YES1P07947 543 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 ETFAP13804 333 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 PRF1P14222 555 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 ENPP1P22413 925 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 SLC6A2P23975 617 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 MDH1P40925 334 aaKnown RBP8.16□□□□□ -1.1
SMC1A-203ENST00000428014 ACAA2P42765 397 aaKnown RBP8.16□□□□□ -1.1
SMC1A-203ENST00000428014 CTBP2P56545 445 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 NME5P56597 212 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 COPZ1P61923 177 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 CDK6Q00534 326 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 FOXF2Q12947 444 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 CYLC2Q14093 348 aaPredicted RBP8.16□□□□□ -1.1
SMC1A-203ENST00000428014 VEZF1Q14119 521 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 MFSD13AQ14CX5 517 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 TOMM34Q15785 309 aaPredicted RBP8.16□□□□□ -1.1
SMC1A-203ENST00000428014 TRMT5Q32P41 509 aaKnown RBP8.16□□□□□ -1.1
SMC1A-203ENST00000428014 TMEM176BQ3YBM2 270 aaPredicted RBP8.16□□□□□ -1.1
SMC1A-203ENST00000428014 OXLD1Q5BKU9 147 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 PAGE3Q5JUK9 113 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 GCNT6Q5T4J0 391 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 FAM91A1Q658Y4 838 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 SLC2A7Q6PXP3 512 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 PAQR6Q6TCH4 344 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 FCRLAQ7L513 359 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 ARPINQ7Z6K5 226 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 P2RY8Q86VZ1 359 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 ADGRG3Q86Y34 549 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 UBQLNLQ8IYU4 475 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 CLEC4FQ8N1N0 589 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 ZNF614Q8N883 585 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 GATSQ8NAP1 163 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 PCYOX1LQ8NBM8 494 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 C11orf65Q8NCR3 313 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 HIPK4Q8NE63 616 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 PIGXQ8TBF5 258 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 STK35Q8TDR2 534 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 DNAJA4Q8WW22 397 aaPredicted RBP8.16□□□□□ -1.1
SMC1A-203ENST00000428014 MBD6Q96DN6 1003 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 ITPKCQ96DU7 683 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 CPPED1Q9BRF8 314 aaPredicted RBP8.16□□□□□ -1.1
SMC1A-203ENST00000428014 PRRG4Q9BZD6 226 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 POLR2J2Q9GZM3 115 aaKnown RBP8.16□□□□□ -1.1
SMC1A-203ENST00000428014 POLR2J3Q9H1A7 115 aaKnown RBP8.16□□□□□ -1.1
SMC1A-203ENST00000428014 KAT8Q9H7Z6 458 aaKnown RBP8.16□□□□□ -1.1
SMC1A-203ENST00000428014 ZFAND3Q9H8U3 227 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 NPHS2Q9NP85 383 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 GALNT8Q9NY28 637 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 ZNF226Q9NYT6 803 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 TMEM181Q9P2C4 612 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 TESQ9UGI8 421 aaKnown RBP8.16□□□□□ -1.1
SMC1A-203ENST00000428014 TESMINQ9Y4I5 508 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 PDZD2O15018 2839 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 POLQO75417 2590 aa8.16□□□□□ -1.1
SMC1A-203ENST00000428014 NPIPA5A0A0B4J1W7 369 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 A0A0G2JND7 137 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 LOC102725191A0A1B0GVB3 256 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 CYSRT1A8MQ03 144 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 A8MVM7 634 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 KDM4EB2RXH2 506 aaPredicted RBP8.15□□□□□ -1.1
SMC1A-203ENST00000428014 EEF1E1-BLOC1S5C9J1V9 151 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 C5orf58C9J3I9 102 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 NPIPA7E9PJI5 369 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 SULT2B1O00204 365 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 TNFSF11O14788 317 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 EEF1E1O43324 174 aaKnown RBP8.15□□□□□ -1.1
SMC1A-203ENST00000428014 OR2T1O43869 369 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 CXCL13O43927 109 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 CCDC22O60826 627 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 BCAS1O75363 584 aaPredicted RBP8.15□□□□□ -1.1
SMC1A-203ENST00000428014 PLGP00747 810 aaPredicted RBP8.15□□□□□ -1.1
SMC1A-203ENST00000428014 BCHEP06276 602 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 NPIPA8P0DM63 369 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 PNMTP11086 282 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 NCF2P19878 526 aaPredicted RBP8.15□□□□□ -1.1
SMC1A-203ENST00000428014 CRYGSP22914 178 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 AGTR1P30556 359 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 UGT2B10P36537 528 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 CPA2P48052 419 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 DIO1P49895 249 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms