RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 PIGTQ969N2 578 aa16.32■□□□□ 0.2
PSPC1-202ENST00000427943 VPS33AQ96AX1 596 aa16.32■□□□□ 0.2
PSPC1-202ENST00000427943 PERPQ96FX8 193 aa16.32■□□□□ 0.2
PSPC1-202ENST00000427943 PIP5K1AQ99755 562 aa16.32■□□□□ 0.2
PSPC1-202ENST00000427943 P2RX2Q9UBL9 471 aa16.32■□□□□ 0.2
PSPC1-202ENST00000427943 LYZL6O75951 148 aa16.31■□□□□ 0.2
PSPC1-202ENST00000427943 BCHEP06276 602 aa16.31■□□□□ 0.2
PSPC1-202ENST00000427943 POLR2JP52435 117 aaKnown RBP16.31■□□□□ 0.2
PSPC1-202ENST00000427943 RPS26P11Q5JNZ5 115 aaPredicted RBP16.31■□□□□ 0.2
PSPC1-202ENST00000427943 C6orf10Q5SRN2 563 aa16.31■□□□□ 0.2
PSPC1-202ENST00000427943 VRK2Q86Y07 508 aa16.31■□□□□ 0.2
PSPC1-202ENST00000427943 ADGRG3Q86Y34 549 aa16.31■□□□□ 0.2
PSPC1-202ENST00000427943 CMIPQ8IY22 773 aa16.31■□□□□ 0.2
PSPC1-202ENST00000427943 MIER2Q8N344 545 aa16.31■□□□□ 0.2
PSPC1-202ENST00000427943 RMND5AQ9H871 391 aa16.31■□□□□ 0.2
PSPC1-202ENST00000427943 ZFHX3Q15911 3703 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 TMED7-TICAM2A0A0A6YYA0 188 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 TMEM72A0PK05 275 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 ZNF724A8MTY0 619 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 PMS2P2O95744 297 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 DBIP07108 87 aaKnown RBP16.3■□□□□ 0.2
PSPC1-202ENST00000427943 DSTNP60981 165 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 ITGADQ13349 1161 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 GNA13Q14344 377 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 CAPRIN1Q14444 709 aaKnown RBP16.3■□□□□ 0.2
PSPC1-202ENST00000427943 TAB1Q15750 504 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 SHEQ5VZ18 495 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 EPGNQ6UW88 154 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 ZNF836Q6ZNA1 936 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 Q6ZT83 130 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 MSANTD1Q6ZTZ1 278 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 BHLHA15Q7RTS1 189 aaPredicted RBP16.3■□□□□ 0.2
PSPC1-202ENST00000427943 ATG4DQ86TL0 474 aaPredicted RBP16.3■□□□□ 0.2
PSPC1-202ENST00000427943 PEX5LQ8IYB4 626 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 ZHX1-C8orf76Q96EF9 292 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 ITCHQ96J02 903 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 HDHD5Q9BXW7 423 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 MTHFD2LQ9H903 347 aaPredicted RBP16.3■□□□□ 0.2
PSPC1-202ENST00000427943 TPT1P8Q9HAU6 139 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 SLCO1B3Q9NPD5 702 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 RLIMQ9NVW2 624 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 OSGIN1Q9UJX0 560 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 TMED7Q9Y3B3 224 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 HDGFL3Q9Y3E1 203 aa16.3■□□□□ 0.2
PSPC1-202ENST00000427943 DSPPQ9NZW4 1301 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 ZNF716A6NP11 495 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 RAMP1O60894 148 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 IGHV3-9P01782 118 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 ZCCHC18P0CG32 403 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 TACR3P29371 465 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 POLR2HP52434 150 aaKnown RBP16.29■□□□□ 0.2
PSPC1-202ENST00000427943 OR2B6P58173 313 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 EPS8Q12929 822 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 P2RY6Q15077 328 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 STK11Q15831 433 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 TTMPQ5BVD1 217 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 SLC2A7Q6PXP3 512 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 GALNT5Q7Z7M9 940 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 MTDHQ86UE4 582 aaKnown RBP16.29■□□□□ 0.2
PSPC1-202ENST00000427943 ZNF100Q8IYN0 542 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 LRRC75A-AS1Q8N1F1 130 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 OR52P1PQ8NH57 321 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 C7orf26Q96N11 449 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 SMR3AQ99954 134 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 TMEM204Q9BSN7 226 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 POTEKPQ9BYX7 375 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 EMC3Q9P0I2 261 aa16.29■□□□□ 0.2
PSPC1-202ENST00000427943 FAM234BA2RU67 622 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 CFAP73A6NFT4 308 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 HS3ST1O14792 307 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 POLR3GO15318 223 aaPredicted RBP16.28■□□□□ 0.2
PSPC1-202ENST00000427943 CLOCKO15516 846 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 ARHGEF9O43307 516 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 GKN3PP0CG01 181 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 FOSL1P15407 271 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 IGHV1-2P23083 117 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 HTR3AP46098 478 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 CRISP3P54108 245 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 STX1BP61266 288 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 LIN52Q52LA3 116 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 CCDC103Q8IW40 242 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 PIGXQ8TBF5 258 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 LRRC8CQ8TDW0 803 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 AKAP1Q92667 903 aaKnown RBP eCLIP16.28■□□□□ 0.2
PSPC1-202ENST00000427943 GTF2H4Q92759 462 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 DDIT4LQ96D03 193 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 TMEM19Q96HH6 336 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 C18orf12Q96KH6 178 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 ATP6V1G3Q96LB4 118 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 EBF4Q9BQW3 602 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 PAIP1Q9H074 479 aaKnown RBP16.28■□□□□ 0.2
PSPC1-202ENST00000427943 TCF7L2Q9NQB0 619 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 ZNF443Q9Y2A4 671 aaPredicted RBP16.28■□□□□ 0.2
PSPC1-202ENST00000427943 NOSIPQ9Y314 301 aaKnown RBP16.28■□□□□ 0.2
PSPC1-202ENST00000427943 CADP27708 2225 aa16.28■□□□□ 0.2
PSPC1-202ENST00000427943 IGKV3D-15A0A087WSY6 115 aa16.27■□□□□ 0.2
PSPC1-202ENST00000427943 ZC3H12DA2A288 527 aaKnown RBP16.27■□□□□ 0.2
PSPC1-202ENST00000427943 CDHR4A6H8M9 788 aa16.27■□□□□ 0.2
PSPC1-202ENST00000427943 FAAHO00519 579 aa16.27■□□□□ 0.2
PSPC1-202ENST00000427943 TFPTP0C1Z6 253 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms