RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 SLC1A3P43003 542 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 OR3A2P47893 321 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 POLR2HP52434 150 aaKnown RBP13.47□□□□□ -0.25
PHF1-204ENST00000427826 CRISP3P54108 245 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 ITGADQ13349 1161 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 TTMPQ5BVD1 217 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 C6orf10Q5SRN2 563 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 SHEQ5VZ18 495 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 Q6ZT83 130 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 SSX8Q7RTT4 187 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 GALNT5Q7Z7M9 940 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 HMGN2P46Q86SG4 172 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 ADGRG3Q86Y34 549 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 WFDC8Q8IUA0 241 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 LRRC75A-AS1Q8N1F1 130 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 KISS1RQ969F8 398 aaPredicted RBP13.47□□□□□ -0.25
PHF1-204ENST00000427826 S100PBPQ96BU1 408 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 DDIT4LQ96D03 193 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 CCL19Q99731 98 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 RAD21L1Q9H4I0 556 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 ARMC7Q9H6L4 198 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 TCF7L2Q9NQB0 619 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 ING1Q9UK53 422 aaPredicted RBP13.47□□□□□ -0.25
PHF1-204ENST00000427826 ZNF232Q9UNY5 417 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 TRAPPC4Q9Y296 219 aa13.47□□□□□ -0.25
PHF1-204ENST00000427826 IGKV3D-15A0A087WSY6 115 aa13.46□□□□□ -0.25
PHF1-204ENST00000427826 GPR171O14626 319 aa13.46□□□□□ -0.25
PHF1-204ENST00000427826 ZNF208O43345 1280 aa13.46□□□□□ -0.25
PHF1-204ENST00000427826 SMPD2O60906 423 aa13.46□□□□□ -0.25
PHF1-204ENST00000427826 ADAP00813 363 aa13.46□□□□□ -0.25
PHF1-204ENST00000427826 TFPTP0C1Z6 253 aa13.46□□□□□ -0.25
PHF1-204ENST00000427826 ETFAP13804 333 aa13.46□□□□□ -0.25
PHF1-204ENST00000427826 MRPL19P49406 292 aaKnown RBP13.46□□□□□ -0.25
PHF1-204ENST00000427826 MVDP53602 400 aa13.46□□□□□ -0.25
PHF1-204ENST00000427826 DSTNP60981 165 aa13.46□□□□□ -0.25
PHF1-204ENST00000427826 IRX1P78414 480 aaPredicted RBP13.46□□□□□ -0.25
PHF1-204ENST00000427826 NKX6-1P78426 367 aaPredicted RBP13.46□□□□□ -0.25
PHF1-204ENST00000427826 FOXD4Q12950 439 aaPredicted RBP13.46□□□□□ -0.25
PHF1-204ENST00000427826 LARS2Q15031 903 aaKnown RBP13.46□□□□□ -0.25
PHF1-204ENST00000427826 LIN52Q52LA3 116 aa13.46□□□□□ -0.25
PHF1-204ENST00000427826 MRPL2Q5T653 305 aaKnown RBP13.46□□□□□ -0.25
PHF1-204ENST00000427826 DNAJC14Q6Y2X3 702 aaPredicted RBP13.46□□□□□ -0.25
PHF1-204ENST00000427826 P3H2Q8IVL5 708 aa13.46□□□□□ -0.25
PHF1-204ENST00000427826 ZNF100Q8IYN0 542 aa13.46□□□□□ -0.25
PHF1-204ENST00000427826 PIGXQ8TBF5 258 aa13.46□□□□□ -0.25
PHF1-204ENST00000427826 DYDC1Q8WWB3 177 aa13.46□□□□□ -0.25
PHF1-204ENST00000427826 VPS33AQ96AX1 596 aa13.46□□□□□ -0.25
PHF1-204ENST00000427826 HS3ST6Q96QI5 342 aa13.46□□□□□ -0.25
PHF1-204ENST00000427826 SLC6A13Q9NSD5 602 aa13.46□□□□□ -0.25
PHF1-204ENST00000427826 TMEM181Q9P2C4 612 aa13.46□□□□□ -0.25
PHF1-204ENST00000427826 MTORP42345 2549 aa13.46□□□□□ -0.26
PHF1-204ENST00000427826 VPS13CQ709C8 3753 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 TMED7-TICAM2A0A0A6YYA0 188 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 A0A0G2JPF8 293 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 HNRNPCL2B2RXH8 293 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 ZNF814B7Z6K7 855 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 HNRNPCL3B7ZW38 293 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 EIF1BO60739 113 aaKnown RBP13.45□□□□□ -0.26
PHF1-204ENST00000427826 HNRNPCL1O60812 293 aaKnown RBP13.45□□□□□ -0.26
PHF1-204ENST00000427826 HNRNPCL4P0DMR1 293 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 OR2B6P58173 313 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 COPZ1P61923 177 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 SLC35A1P78382 337 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 PLAURQ03405 335 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 EPS8Q12929 822 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 ABLIM2Q6H8Q1 611 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 ZNF704Q6ZNC4 412 aaPredicted RBP13.45□□□□□ -0.26
PHF1-204ENST00000427826 BHLHA15Q7RTS1 189 aaPredicted RBP13.45□□□□□ -0.26
PHF1-204ENST00000427826 OR9I1Q8NGQ6 314 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 OR52P1PQ8NH57 321 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 SLC38A5Q8WUX1 472 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 GTF2H4Q92759 462 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 PLPPR2Q96GM1 343 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 NAA11Q9BSU3 229 aaPredicted RBP13.45□□□□□ -0.26
PHF1-204ENST00000427826 CCDC28BQ9BUN5 200 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 TMEM45AQ9NWC5 275 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 OSGIN1Q9UJX0 560 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 IFT52Q9Y366 437 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 TMED7Q9Y3B3 224 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 HEATR5AQ86XA9 2040 aa13.45□□□□□ -0.26
PHF1-204ENST00000427826 ZNF469Q96JG9 3925 aaPredicted RBP13.45□□□□□ -0.26
PHF1-204ENST00000427826 DSPPQ9NZW4 1301 aa13.44□□□□□ -0.26
PHF1-204ENST00000427826 CDHR4A6H8M9 788 aa13.44□□□□□ -0.26
PHF1-204ENST00000427826 AP3D1O14617 1153 aa13.44□□□□□ -0.26
PHF1-204ENST00000427826 TMCC2O75069 709 aa13.44□□□□□ -0.26
PHF1-204ENST00000427826 ADAM11O75078 769 aa13.44□□□□□ -0.26
PHF1-204ENST00000427826 BCHEP06276 602 aa13.44□□□□□ -0.26
PHF1-204ENST00000427826 THBS1P07996 1170 aa13.44□□□□□ -0.26
PHF1-204ENST00000427826 CCNA2P20248 432 aa13.44□□□□□ -0.26
PHF1-204ENST00000427826 TACR3P29371 465 aa13.44□□□□□ -0.26
PHF1-204ENST00000427826 IDH3AP50213 366 aa13.44□□□□□ -0.26
PHF1-204ENST00000427826 FADDQ13158 208 aa13.44□□□□□ -0.26
PHF1-204ENST00000427826 MAPK11Q15759 364 aa13.44□□□□□ -0.26
PHF1-204ENST00000427826 RNF220Q5VTB9 566 aa13.44□□□□□ -0.26
PHF1-204ENST00000427826 PRAMEF8Q5VWM4 474 aa13.44□□□□□ -0.26
PHF1-204ENST00000427826 PRAMEF7Q5VXH5 474 aa13.44□□□□□ -0.26
PHF1-204ENST00000427826 P2RY8Q86VZ1 359 aa13.44□□□□□ -0.26
PHF1-204ENST00000427826 ZNF775Q96BV0 537 aaPredicted RBP13.44□□□□□ -0.26
PHF1-204ENST00000427826 ARL5BQ96KC2 179 aa13.44□□□□□ -0.26
PHF1-204ENST00000427826 ZNF300Q96RE9 604 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms