RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 POMT2Q9UKY4 750 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 CHD8Q9HCK8 2581 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 IQCMA0A1B0GVH7 501 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 KLK8O60259 260 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 PRKNO60260 465 aaPredicted RBP9.88□□□□□ -0.83
TCOF1-204ENST00000427724 WDPCPO95876 746 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 PLATP00750 562 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 IL2RAP01589 272 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 CDK1P06493 297 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 RHCEP18577 417 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 TGM1P22735 817 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 LIPAP38571 399 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 SMSP52788 366 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 KLHL26Q53HC5 615 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 XKRXQ6PP77 449 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 LHFPL3Q86UP9 236 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 MEX3DQ86XN8 651 aaKnown RBP9.88□□□□□ -0.83
TCOF1-204ENST00000427724 ERMAPQ96PL5 475 aaPredicted RBP9.88□□□□□ -0.83
TCOF1-204ENST00000427724 CSF3RQ99062 836 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 SLC6A13Q9NSD5 602 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 C2orf42Q9NWW7 574 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 PILRBQ9UKJ0 227 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 MGAT4BQ9UQ53 548 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 MMACHCQ9Y4U1 282 aa9.88□□□□□ -0.83
TCOF1-204ENST00000427724 ZFC3H1O60293 1989 aaKnown RBP9.88□□□□□ -0.83
TCOF1-204ENST00000427724 TRAV17A0A0B4J275 112 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 FRS3O43559 492 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 PRR35P0CG20 571 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 CELP19835 753 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 RGS6P49758 472 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 EFNA3P52797 238 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 CDH11P55287 796 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 BTG2P78543 158 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 PIN1Q13526 163 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-204ENST00000427724 ARL9Q6T311 187 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 GALNTL5Q7Z4T8 443 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 PSD2Q9BQI7 771 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 KLHL31Q9H511 634 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 RNF167Q9H6Y7 350 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 FKBP14Q9NWM8 211 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 CTSFQ9UBX1 484 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 ATPIF1Q9UII2 106 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 KLF13Q9Y2Y9 288 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-204ENST00000427724 DSCR3O14972 297 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 SPINT1O43278 529 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 GALR3O60755 368 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-204ENST00000427724 RPP14O95059 124 aaKnown RBP9.87□□□□□ -0.83
TCOF1-204ENST00000427724 HOXB3P14651 431 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-204ENST00000427724 SPNP16150 400 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 TRIM23P36406 574 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 AP2S1P53680 142 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-204ENST00000427724 SLC35A2P78381 396 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 CLPPQ16740 277 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-204ENST00000427724 SHFQ7M4L6 423 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 YRDCQ86U90 279 aaKnown RBP9.87□□□□□ -0.83
TCOF1-204ENST00000427724 COMMD7Q86VX2 200 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 ENTHD1Q8IYW4 607 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 PIAS4Q8N2W9 510 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-204ENST00000427724 BBS10Q8TAM1 723 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 GPBAR1Q8TDU6 330 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-204ENST00000427724 LRR1Q96L50 414 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 SRA1Q9HD15 236 aaKnown RBP9.87□□□□□ -0.83
TCOF1-204ENST00000427724 NEU3Q9UQ49 428 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 EMC9Q9Y3B6 208 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 ATG4BQ9Y4P1 393 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 PCDHGA6Q9Y5G7 932 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 DICER1Q9UPY3 1922 aaKnown RBP9.87□□□□□ -0.83
TCOF1-204ENST00000427724 A0A1W2PQL4 384 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-204ENST00000427724 M0R3H8 397 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 DPM1O60762 260 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 PTHP01270 115 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 DBIP07108 87 aaKnown RBP9.87□□□□□ -0.83
TCOF1-204ENST00000427724 PRKCAP17252 672 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 STOMP27105 288 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 PCGF2P35227 344 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 RPL35P42766 123 aaKnown RBP9.87□□□□□ -0.83
TCOF1-204ENST00000427724 SLC10A1Q14973 349 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 YOD1Q5VVQ6 348 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-204ENST00000427724 SIGIRRQ6IA17 410 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 ABHD17CQ6PCB6 329 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 OR4D9Q8NGE8 314 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 CHTF18Q8WVB6 975 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 GON7Q9BXV9 100 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 APMAPQ9HDC9 416 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 VNN3Q9NY84 501 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 USP36Q9P275 1121 aaKnown RBP9.87□□□□□ -0.83
TCOF1-204ENST00000427724 B8ZZF3 427 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 SMLR1H3BR10 107 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 DCAF7P61962 342 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 ODF4Q2M2E3 257 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 USP51Q70EK9 711 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 MMP21Q8N119 569 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 ZNF283Q8N7M2 679 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 OR8J1Q8NGP2 316 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 CDS1Q92903 461 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 DDIT4LQ96D03 193 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 NEDD4LQ96PU5 975 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 TMEM121BQ9BXQ6 578 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-204ENST00000427724 MTHFD2LQ9H903 347 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms