RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 GABRG1Q8N1C3 465 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 SLC38A5Q8WUX1 472 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 GTF2H4Q92759 462 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 S100PBPQ96BU1 408 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 DDIT4LQ96D03 193 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 ARL5BQ96KC2 179 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 CCDC28BQ9BUN5 200 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 OR11A1Q9GZK7 315 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 RAD21L1Q9H4I0 556 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 BEX4Q9NWD9 120 aaPredicted RBP16.37■□□□□ 0.21
GPC1-205ENST00000427506 EMC3Q9P0I2 261 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 ING1Q9UK53 422 aaPredicted RBP16.37■□□□□ 0.21
GPC1-205ENST00000427506 ZNF232Q9UNY5 417 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 TMED7Q9Y3B3 224 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 PCDHB14Q9Y5E9 798 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 HEATR5AQ86XA9 2040 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 TEP1Q99973 2627 aaKnown RBP16.36■□□□□ 0.21
GPC1-205ENST00000427506 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.36■□□□□ 0.21
GPC1-205ENST00000427506 ZNF724A8MTY0 619 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 KLF4O43474 513 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 PMS2P2O95744 297 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 TFPTP0C1Z6 253 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 TACR3P29371 465 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 SLC1A3P43003 542 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 OR3A2P47893 321 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 NR1H2P55055 460 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 EPS8Q12929 822 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 MAPK11Q15759 364 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 RPS26P11Q5JNZ5 115 aaPredicted RBP16.36■□□□□ 0.21
GPC1-205ENST00000427506 SFRP5Q5T4F7 317 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 ZNF836Q6ZNA1 936 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.36■□□□□ 0.21
GPC1-205ENST00000427506 GALNT5Q7Z7M9 940 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 ZNF100Q8IYN0 542 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 KISS1RQ969F8 398 aaPredicted RBP16.36■□□□□ 0.21
GPC1-205ENST00000427506 TMEM19Q96HH6 336 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 TMUB1Q9BVT8 246 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 PAIP1Q9H074 479 aaKnown RBP16.36■□□□□ 0.21
GPC1-205ENST00000427506 RLIMQ9NVW2 624 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 CCDC167Q9P0B6 97 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 PRSS50Q9UI38 385 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 OSGIN1Q9UJX0 560 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 AKAP6Q13023 2319 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 HIVEP1P15822 2718 aa16.36■□□□□ 0.21
GPC1-205ENST00000427506 A0A0G2JPF8 293 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 HNRNPCL2B2RXH8 293 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 ZNF814B7Z6K7 855 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 HNRNPCL3B7ZW38 293 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 CLIC1O00299 241 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 NR5A2O00482 541 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 HNRNPCL1O60812 293 aaKnown RBP16.35■□□□□ 0.21
GPC1-205ENST00000427506 GKN3PP0CG01 181 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 HNRNPCL4P0DMR1 293 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 MRPL19P49406 292 aaKnown RBP16.35■□□□□ 0.21
GPC1-205ENST00000427506 ADAM8P78325 824 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 ITGADQ13349 1161 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 LARS2Q15031 903 aaKnown RBP16.35■□□□□ 0.21
GPC1-205ENST00000427506 P2RY6Q15077 328 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 RGNQ15493 299 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 PIGXQ8TBF5 258 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 PIGTQ969N2 578 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 PLPPR2Q96GM1 343 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 CCL19Q99731 98 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 ARMC7Q9H6L4 198 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 TMEM181Q9P2C4 612 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 ZNF443Q9Y2A4 671 aaPredicted RBP16.35■□□□□ 0.21
GPC1-205ENST00000427506 CELSR1Q9NYQ6 3014 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 DSPPQ9NZW4 1301 aa16.35■□□□□ 0.21
GPC1-205ENST00000427506 A0A096LPI6 279 aa16.34■□□□□ 0.21
GPC1-205ENST00000427506 TMEM72A0PK05 275 aa16.34■□□□□ 0.21
GPC1-205ENST00000427506 CDHR4A6H8M9 788 aa16.34■□□□□ 0.21
GPC1-205ENST00000427506 C5orf58C9J3I9 102 aa16.34■□□□□ 0.21
GPC1-205ENST00000427506 FAAHO00519 579 aa16.34■□□□□ 0.21
GPC1-205ENST00000427506 SMPD2O60906 423 aa16.34■□□□□ 0.21
GPC1-205ENST00000427506 CXCR1P25024 350 aa16.34■□□□□ 0.21
GPC1-205ENST00000427506 LOXP28300 417 aaPredicted RBP16.34■□□□□ 0.21
GPC1-205ENST00000427506 COPZ1P61923 177 aa16.34■□□□□ 0.21
GPC1-205ENST00000427506 FOXD4Q12950 439 aaPredicted RBP16.34■□□□□ 0.21
GPC1-205ENST00000427506 CAPRIN1Q14444 709 aaKnown RBP16.34■□□□□ 0.21
GPC1-205ENST00000427506 PDK3Q15120 406 aa16.34■□□□□ 0.21
GPC1-205ENST00000427506 ABLIM2Q6H8Q1 611 aa16.34■□□□□ 0.21
GPC1-205ENST00000427506 BLOC1S3Q6QNY0 202 aa16.34■□□□□ 0.21
GPC1-205ENST00000427506 Q6ZT83 130 aa16.34■□□□□ 0.21
GPC1-205ENST00000427506 BHLHA15Q7RTS1 189 aaPredicted RBP16.34■□□□□ 0.21
GPC1-205ENST00000427506 CADM2Q8N3J6 435 aa16.34■□□□□ 0.21
GPC1-205ENST00000427506 SPDL1Q96EA4 605 aa16.34■□□□□ 0.21
GPC1-205ENST00000427506 VIPAS39Q9H9C1 493 aa16.34■□□□□ 0.21
GPC1-205ENST00000427506 NGBQ9NPG2 151 aa16.34■□□□□ 0.21
GPC1-205ENST00000427506 TRAPPC4Q9Y296 219 aa16.34■□□□□ 0.21
GPC1-205ENST00000427506 NOSIPQ9Y314 301 aaKnown RBP16.34■□□□□ 0.21
GPC1-205ENST00000427506 PRRC2AP48634 2157 aaKnown RBP16.34■□□□□ 0.21
GPC1-205ENST00000427506 ABCA4P78363 2273 aa16.33■□□□□ 0.2
GPC1-205ENST00000427506 GPR171O14626 319 aa16.33■□□□□ 0.2
GPC1-205ENST00000427506 ZNF208O43345 1280 aa16.33■□□□□ 0.2
GPC1-205ENST00000427506 DNPH1O43598 174 aa16.33■□□□□ 0.2
GPC1-205ENST00000427506 LYZL6O75951 148 aa16.33■□□□□ 0.2
GPC1-205ENST00000427506 THBS1P07996 1170 aa16.33■□□□□ 0.2
GPC1-205ENST00000427506 NUDT7P0C024 238 aa16.33■□□□□ 0.2
GPC1-205ENST00000427506 NCF2P19878 526 aaPredicted RBP16.33■□□□□ 0.2
GPC1-205ENST00000427506 MAP2K6P52564 334 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms