RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 MAPKAP1Q9BPZ7 522 aa4.6□□□□□ -1.67
LINC00458-202ENST00000427299 PRRG3Q9BZD7 231 aa4.6□□□□□ -1.67
LINC00458-202ENST00000427299 SLIRPQ9GZT3 109 aaKnown RBP4.6□□□□□ -1.67
LINC00458-202ENST00000427299 C6orf62Q9GZU0 229 aaPredicted RBP4.6□□□□□ -1.67
LINC00458-202ENST00000427299 ESRP2Q9H6T0 727 aaKnown RBP4.6□□□□□ -1.67
LINC00458-202ENST00000427299 SDF2L1Q9HCN8 221 aa4.6□□□□□ -1.67
LINC00458-202ENST00000427299 BPIFA1Q9NP55 256 aa4.6□□□□□ -1.67
LINC00458-202ENST00000427299 DYRK4Q9NR20 520 aa4.6□□□□□ -1.67
LINC00458-202ENST00000427299 CYSLTR2Q9NS75 346 aa4.6□□□□□ -1.67
LINC00458-202ENST00000427299 ELOVL2Q9NXB9 296 aa4.6□□□□□ -1.67
LINC00458-202ENST00000427299 RNF6Q9Y252 685 aa4.6□□□□□ -1.67
LINC00458-202ENST00000427299 GRIP1Q9Y3R0 1128 aa4.6□□□□□ -1.67
LINC00458-202ENST00000427299 YIPF1Q9Y548 306 aa4.6□□□□□ -1.67
LINC00458-202ENST00000427299 U3KQV3 271 aa4.6□□□□□ -1.67
LINC00458-202ENST00000427299 IGLV3-16A0A075B6K0 115 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 KCNE1BA0A087WTH5 132 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 HTR3EA5X5Y0 456 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 ZNF840PA6NDX5 716 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 PRR23AA6NEV1 266 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 LOC730098B7Z3J9 87 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 BMPR1BO00238 502 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 TNFRSF11BO00300 401 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 CACNB4O00305 520 aaPredicted RBP4.59□□□□□ -1.67
LINC00458-202ENST00000427299 TAPBPO15533 448 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 COCHO43405 550 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 XPNPEP2O43895 674 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 NDUFB4O95168 129 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 SNX4O95219 450 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 PCNTO95613 3336 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 KRT75O95678 551 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 OXSR1O95747 527 aaPredicted RBP4.59□□□□□ -1.67
LINC00458-202ENST00000427299 KRT8P05787 483 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 CDK1P06493 297 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 TRAPPC2P0DI81 140 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 TRAPPC2BP0DI82 140 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 ADORA3P0DMS8 318 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 TFPIP10646 304 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 RRM2P31350 389 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 TIA1P31483 386 aaKnown RBP eCLIP4.59□□□□□ -1.67
LINC00458-202ENST00000427299 KDELR2P33947 212 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 TGFBR2P37173 567 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 CSKP41240 450 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 AMTP48728 403 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 CAMPP49913 170 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 GZMMP51124 257 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 DAPP51397 102 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 IST1P53990 364 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 VBP1P61758 197 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 NCS1P62166 190 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 SPIBQ01892 262 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 IRF8Q02556 426 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 RUNX1T1Q06455 604 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 ZNF763Q0D2J5 394 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 SNTB1Q13884 538 aaKnown RBP4.59□□□□□ -1.67
LINC00458-202ENST00000427299 ARHGEF6Q15052 776 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 MAPK11Q15759 364 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 NDUFA9Q16795 377 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 PHKG1Q16816 387 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 ZNF630Q2M218 657 aaPredicted RBP4.59□□□□□ -1.67
LINC00458-202ENST00000427299 HKDC1Q2TB90 917 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 ADPRMQ3LIE5 342 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 GTDC1Q4AE62 458 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 MPPE1Q53F39 396 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 ARMCX4Q5H9R4 360 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 TPRG1LQ5T0D9 272 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 GCNT6Q5T4J0 391 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 MEDAGQ5VYS4 303 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 OR4F3Q6IEY1 312 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 ZNF544Q6NX49 715 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 NOXRED1Q6NXP6 359 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 C22orf39Q6P5X5 142 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 TRIM40Q6P9F5 258 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 C11orf88Q6PI97 169 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 XKRXQ6PP77 449 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 GDPGP1Q6ZNW5 385 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 CYP4Z1Q86W10 505 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 DNAJC22Q8N4W6 341 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 KRTCAP2Q8N6L1 136 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 NEXN-AS1Q8NBZ9 246 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 KLHDC9Q8NEP7 349 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 TRPV1Q8NER1 839 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 OR10G2Q8NGC3 310 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 OR2AP1Q8NGE2 309 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 OR8H1Q8NGG4 311 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 CLHC1Q8NHS4 586 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 RHOXF1Q8NHV9 184 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 LKAAEAR1Q8TD35 194 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 PIH1D2Q8WWB5 315 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 ASZ1Q8WWH4 475 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 UBE2E3Q969T4 207 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 ESAMQ96AP7 390 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 LGALS12Q96DT0 336 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 MTERF3Q96E29 417 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 ELMOD3Q96FG2 381 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 SIPA1Q96FS4 1042 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 Q96MT0 163 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 DOHHQ9BU89 302 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 OR2B2Q9GZK3 357 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 NXF2Q9GZY0 626 aaKnown RBP4.59□□□□□ -1.67
LINC00458-202ENST00000427299 KCNN2Q9H2S1 579 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms