RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 GLI4P10075 376 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 EIF1AXP47813 144 aaKnown RBP21.99■■□□□ 1.11
VEGFA-209ENST00000425836 OR1E2P47887 323 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 PMPCAQ10713 525 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 BNIP2Q12982 314 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 TMEM211Q6ICI0 200 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 CLEC18BQ6UXF7 455 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 ATG4DQ86TL0 474 aaPredicted RBP21.99■■□□□ 1.11
VEGFA-209ENST00000425836 CLEC18CQ8NCF0 446 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 PHF10Q8WUB8 498 aaKnown RBP21.99■■□□□ 1.11
VEGFA-209ENST00000425836 SLC25A43Q8WUT9 341 aaPredicted RBP21.99■■□□□ 1.11
VEGFA-209ENST00000425836 CCDC120Q96HB5 630 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 ZNF845Q96IR2 970 aaPredicted RBP21.99■■□□□ 1.11
VEGFA-209ENST00000425836 UCN2Q96RP3 112 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 ZNF208O43345 1280 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 CXCR1P25024 350 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 FKBP2P26885 142 aaKnown RBP21.99■■□□□ 1.11
VEGFA-209ENST00000425836 NUP107P57740 925 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 SYT14P1Q58G82 188 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 HBMQ6B0K9 141 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 OSTF1Q92882 214 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 RPS6KA6Q9UK32 745 aa21.99■■□□□ 1.11
VEGFA-209ENST00000425836 A0A1W2PNR3 127 aa21.98■■□□□ 1.11
VEGFA-209ENST00000425836 CXCL13O43927 109 aa21.98■■□□□ 1.11
VEGFA-209ENST00000425836 SLC7A1P30825 629 aa21.98■■□□□ 1.11
VEGFA-209ENST00000425836 MAP2K6P52564 334 aa21.98■■□□□ 1.11
VEGFA-209ENST00000425836 ENTPD8Q5MY95 495 aa21.98■■□□□ 1.11
VEGFA-209ENST00000425836 PDSS1Q5T2R2 415 aa21.98■■□□□ 1.11
VEGFA-209ENST00000425836 TSPYL5Q86VY4 417 aaPredicted RBP21.98■■□□□ 1.11
VEGFA-209ENST00000425836 FAM26EQ8N5C1 309 aa21.98■■□□□ 1.11
VEGFA-209ENST00000425836 DNAJA4Q8WW22 397 aaPredicted RBP21.98■■□□□ 1.11
VEGFA-209ENST00000425836 HSH2DQ96JZ2 352 aa21.98■■□□□ 1.11
VEGFA-209ENST00000425836 OR11A1Q9GZK7 315 aa21.98■■□□□ 1.11
VEGFA-209ENST00000425836 COQ10BQ9H8M1 238 aa21.98■■□□□ 1.11
VEGFA-209ENST00000425836 CLCF1Q9UBD9 225 aa21.98■■□□□ 1.11
VEGFA-209ENST00000425836 UBR5O95071 2799 aaPredicted RBP21.97■■□□□ 1.11
VEGFA-209ENST00000425836 A0A0B4J2E0 115 aa21.97■■□□□ 1.11
VEGFA-209ENST00000425836 A0A1B0GX12 115 aa21.97■■□□□ 1.11
VEGFA-209ENST00000425836 TOXO94900 526 aa21.97■■□□□ 1.11
VEGFA-209ENST00000425836 AGFG2O95081 481 aa21.97■■□□□ 1.11
VEGFA-209ENST00000425836 TFPIP10646 304 aa21.97■■□□□ 1.11
VEGFA-209ENST00000425836 CARD18P57730 90 aa21.97■■□□□ 1.11
VEGFA-209ENST00000425836 ADORA2A-AS1P86434 159 aa21.97■■□□□ 1.11
VEGFA-209ENST00000425836 SGCBQ16585 318 aa21.97■■□□□ 1.11
VEGFA-209ENST00000425836 MTFR2Q6P444 385 aa21.97■■□□□ 1.11
VEGFA-209ENST00000425836 ULK3Q6PHR2 472 aa21.97■■□□□ 1.11
VEGFA-209ENST00000425836 NSMCE2Q96MF7 247 aa21.97■■□□□ 1.11
VEGFA-209ENST00000425836 OR5B2Q96R09 309 aa21.97■■□□□ 1.11
VEGFA-209ENST00000425836 C12orf10Q9HB07 376 aa21.97■■□□□ 1.11
VEGFA-209ENST00000425836 ZC3H12DA2A288 527 aaKnown RBP21.96■■□□□ 1.11
VEGFA-209ENST00000425836 CPSF4LA6NMK7 179 aaKnown RBP21.96■■□□□ 1.11
VEGFA-209ENST00000425836 TGM6O95932 706 aa21.96■■□□□ 1.11
VEGFA-209ENST00000425836 CLK1P49759 484 aaKnown RBP21.96■■□□□ 1.11
VEGFA-209ENST00000425836 RASSF2P50749 326 aa21.96■■□□□ 1.11
VEGFA-209ENST00000425836 PER3P56645 1201 aa21.96■■□□□ 1.11
VEGFA-209ENST00000425836 TRIM25Q14258 630 aaKnown RBP21.96■■□□□ 1.11
VEGFA-209ENST00000425836 IFI44LQ53G44 452 aa21.96■■□□□ 1.11
VEGFA-209ENST00000425836 ALG10BQ5I7T1 473 aa21.96■■□□□ 1.11
VEGFA-209ENST00000425836 ZNF613Q6PF04 617 aa21.96■■□□□ 1.11
VEGFA-209ENST00000425836 FKBP9P1Q75LS8 142 aa21.96■■□□□ 1.11
VEGFA-209ENST00000425836 WNT2BQ93097 391 aa21.96■■□□□ 1.11
VEGFA-209ENST00000425836 DDIT4LQ96D03 193 aa21.96■■□□□ 1.11
VEGFA-209ENST00000425836 ARL5BQ96KC2 179 aa21.96■■□□□ 1.11
VEGFA-209ENST00000425836 PAQR5Q9NXK6 330 aaPredicted RBP21.96■■□□□ 1.11
VEGFA-209ENST00000425836 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.96■■□□□ 1.11
VEGFA-209ENST00000425836 ACTR3BQ9P1U1 418 aa21.96■■□□□ 1.11
VEGFA-209ENST00000425836 SAMD4AQ9UPU9 718 aaKnown RBP21.96■■□□□ 1.11
VEGFA-209ENST00000425836 MBD3L4A6NDZ8 208 aaPredicted RBP21.95■■□□□ 1.11
VEGFA-209ENST00000425836 MBD3L3A6NE82 208 aaPredicted RBP21.95■■□□□ 1.11
VEGFA-209ENST00000425836 MBD3L5A6NJ08 208 aaPredicted RBP21.95■■□□□ 1.11
VEGFA-209ENST00000425836 DNAJC8O75937 253 aaPredicted RBP21.95■■□□□ 1.11
VEGFA-209ENST00000425836 LDLRP01130 860 aa21.95■■□□□ 1.11
VEGFA-209ENST00000425836 TIMP3P35625 211 aa21.95■■□□□ 1.11
VEGFA-209ENST00000425836 CDH12P55289 794 aa21.95■■□□□ 1.11
VEGFA-209ENST00000425836 MS4A2Q01362 244 aa21.95■■□□□ 1.11
VEGFA-209ENST00000425836 PON3Q15166 354 aa21.95■■□□□ 1.11
VEGFA-209ENST00000425836 PGM2L1Q6PCE3 622 aa21.95■■□□□ 1.11
VEGFA-209ENST00000425836 DEF8Q6ZN54 512 aa21.95■■□□□ 1.11
VEGFA-209ENST00000425836 TMPPEQ6ZT21 453 aa21.95■■□□□ 1.11
VEGFA-209ENST00000425836 FAM86B1Q8N7N1 296 aa21.95■■□□□ 1.11
VEGFA-209ENST00000425836 C9orf106Q8NAJ2 232 aa21.95■■□□□ 1.11
VEGFA-209ENST00000425836 MBD3L2Q8NHZ7 208 aaPredicted RBP21.95■■□□□ 1.11
VEGFA-209ENST00000425836 ADAMTS16Q8TE57 1224 aa21.95■■□□□ 1.11
VEGFA-209ENST00000425836 GEMIN6Q8WXD5 167 aaKnown RBP21.95■■□□□ 1.11
VEGFA-209ENST00000425836 RND1Q92730 232 aa21.95■■□□□ 1.11
VEGFA-209ENST00000425836 SLC38A4Q969I6 547 aa21.95■■□□□ 1.11
VEGFA-209ENST00000425836 SLC47A1Q96FL8 570 aa21.95■■□□□ 1.11
VEGFA-209ENST00000425836 SRXN1Q9BYN0 137 aa21.95■■□□□ 1.11
VEGFA-209ENST00000425836 SELENONQ9NZV5 590 aa21.95■■□□□ 1.11
VEGFA-209ENST00000425836 WIPF3A6NGB9 483 aa21.95■■□□□ 1.1
VEGFA-209ENST00000425836 SLC22A20A6NK97 555 aa21.95■■□□□ 1.1
VEGFA-209ENST00000425836 ELOA3DA6NLF2 546 aaPredicted RBP21.95■■□□□ 1.1
VEGFA-209ENST00000425836 GSC2O15499 205 aa21.95■■□□□ 1.1
VEGFA-209ENST00000425836 ZG16O60844 167 aa21.95■■□□□ 1.1
VEGFA-209ENST00000425836 PRKD3O94806 890 aa21.95■■□□□ 1.1
VEGFA-209ENST00000425836 THY1P04216 161 aa21.95■■□□□ 1.1
VEGFA-209ENST00000425836 PNMTP11086 282 aa21.95■■□□□ 1.1
VEGFA-209ENST00000425836 MYBPHQ13203 477 aa21.95■■□□□ 1.1
VEGFA-209ENST00000425836 ELOA3BQ3SY89 546 aa21.95■■□□□ 1.1
VEGFA-209ENST00000425836 ELOA3Q8NG57 546 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms