RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 LCE1AQ5T7P2 110 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 PLPP4Q5VZY2 271 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 TCEAL6Q6IPX3 200 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 REEP3Q6NUK4 255 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 PAQR6Q6TCH4 344 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 GDPD4Q6W3E5 623 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 C17orf107Q6ZR85 190 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 C19orf35Q6ZS72 473 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 CTU1Q7Z7A3 348 aaKnown RBP3.27□□□□□ -1.89
SF3B1-205ENST00000424674 ERICH1Q86X53 443 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 RCOR2Q8IZ40 523 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 MCOLN2Q8IZK6 566 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 METTL4Q8N3J2 472 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 TBC1D19Q8N5T2 526 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 ADAD2Q8NCV1 583 aaKnown RBP3.27□□□□□ -1.89
SF3B1-205ENST00000424674 ACVR1CQ8NER5 493 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 OR11H4Q8NGC9 324 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 OR5D18Q8NGL1 313 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 OR4C15Q8NGM1 316 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 OR6N2Q8NGY6 317 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 OR52E5Q8NH55 327 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 FGFBP3Q8TAT2 258 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 MAGEC3Q8TD91 643 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 ZNF473Q8WTR7 871 aaKnown RBP3.27□□□□□ -1.89
SF3B1-205ENST00000424674 SLC35F5Q8WV83 523 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 TM9SF4Q92544 642 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 PIGTQ969N2 578 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 SLC35B4Q969S0 331 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 BIRC7Q96CA5 298 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 ZFP3Q96NJ6 502 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 HSD17B14Q9BPX1 270 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 MAPKAP1Q9BPZ7 522 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 ECSITQ9BQ95 431 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 SYT4Q9H2B2 425 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 KLHL31Q9H511 634 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 NIPAL2Q9H841 368 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 S100A14Q9HCY8 104 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 NDE1Q9NXR1 346 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 TAS2R7Q9NYW3 318 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 IL36GQ9NZH8 169 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 BFARQ9NZS9 450 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 POLKQ9UBT6 870 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 DAPK2Q9UIK4 370 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 C3orf18Q9UK00 162 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 KLHDC2Q9Y2U9 406 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 SLC6A5Q9Y345 797 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 WIPI2Q9Y4P8 454 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 MMP24Q9Y5R2 645 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 TSSC4Q9Y5U2 329 aaPredicted RBP3.27□□□□□ -1.89
SF3B1-205ENST00000424674 ALG6Q9Y672 507 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 AUP1Q9Y679 476 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 ATP10AO60312 1499 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 FHAD1B1AJZ9 1412 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 PRAG1Q86YV5 1406 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 PEG3Q9GZU2 1588 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 ZNF521Q96K83 1311 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 SLC22A23A1A5C7 686 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 C2CD4BA6NLJ0 364 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 H0YJX3 145 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 H3BMH7 237 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 TMEM178BH3BS89 294 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 ZBTB5O15062 677 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 IDH3BO43837 385 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 PCDH7O60245 1069 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 NXPH2O95156 264 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 BMP15O95972 392 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 HMGN1P05114 100 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 FABP1P07148 127 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 GP1BBP13224 206 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 ZNF7P17097 686 aaPredicted RBP3.26□□□□□ -1.89
SF3B1-205ENST00000424674 GLRA1P23415 457 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 EPHA2P29317 976 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 EPHX2P34913 555 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 TNFSF9P41273 254 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 GPR1P46091 355 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 RFX5P48382 616 aaPredicted RBP3.26□□□□□ -1.89
SF3B1-205ENST00000424674 GLUD2P49448 558 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 TMEM50BP56557 158 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 TMPRSS3P57727 454 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 NUP107P57740 925 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 MLF1P58340 268 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 SEC61BP60468 96 aaKnown RBP3.26□□□□□ -1.89
SF3B1-205ENST00000424674 ISL1P61371 349 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 RPS18P62269 152 aaKnown RBP3.26□□□□□ -1.89
SF3B1-205ENST00000424674 RPS4XP62701 263 aaKnown RBP3.26□□□□□ -1.89
SF3B1-205ENST00000424674 ZNF33AQ06730 810 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 CYP24A1Q07973 514 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 SELENBP1Q13228 472 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 SERTAD2Q14140 314 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 TSC22D1Q15714 1073 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 ZNF77Q15935 545 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 HAGHQ16775 308 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 SLC36A2Q495M3 483 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 ACTBL2Q562R1 376 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 BEND6Q5SZJ8 279 aaPredicted RBP3.26□□□□□ -1.89
SF3B1-205ENST00000424674 UTF1Q5T230 341 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 DHRS11Q6UWP2 260 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 LRRC31Q6UY01 552 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 Q6ZRG5 221 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 SSX7Q7RTT5 188 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms