RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 PIGXQ8TBF5 258 aa15.34■□□□□ 0.05
MSH6-203ENST00000420813 GTPBP3Q969Y2 492 aaKnown RBP15.34■□□□□ 0.05
MSH6-203ENST00000420813 ZNF775Q96BV0 537 aaPredicted RBP15.34■□□□□ 0.05
MSH6-203ENST00000420813 CCDC115Q96NT0 180 aa15.34■□□□□ 0.05
MSH6-203ENST00000420813 SLC35A5Q9BS91 424 aa15.34■□□□□ 0.05
MSH6-203ENST00000420813 MEAF6Q9HAF1 191 aa15.34■□□□□ 0.05
MSH6-203ENST00000420813 CTPS2Q9NRF8 586 aa15.34■□□□□ 0.05
MSH6-203ENST00000420813 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.34■□□□□ 0.05
MSH6-203ENST00000420813 BTNL2Q9UIR0 455 aa15.34■□□□□ 0.05
MSH6-203ENST00000420813 LIPT1Q9Y234 373 aa15.34■□□□□ 0.05
MSH6-203ENST00000420813 DNHD1Q96M86 4753 aa15.34■□□□□ 0.05
MSH6-203ENST00000420813 OR5H1A6NKK0 313 aa15.33■□□□□ 0.04
MSH6-203ENST00000420813 ZNF716A6NP11 495 aa15.33■□□□□ 0.04
MSH6-203ENST00000420813 GPR171O14626 319 aa15.33■□□□□ 0.04
MSH6-203ENST00000420813 BCAS1O75363 584 aaPredicted RBP15.33■□□□□ 0.04
MSH6-203ENST00000420813 TFPIP10646 304 aa15.33■□□□□ 0.04
MSH6-203ENST00000420813 S100A3P33764 101 aa15.33■□□□□ 0.04
MSH6-203ENST00000420813 CHI3L1P36222 383 aaPredicted RBP15.33■□□□□ 0.04
MSH6-203ENST00000420813 HTR3AP46098 478 aa15.33■□□□□ 0.04
MSH6-203ENST00000420813 SLC16A1P53985 500 aa15.33■□□□□ 0.04
MSH6-203ENST00000420813 FAM174BQ3ZCQ3 159 aa15.33■□□□□ 0.04
MSH6-203ENST00000420813 GPAT3Q53EU6 434 aa15.33■□□□□ 0.04
MSH6-203ENST00000420813 FBXW9Q5XUX1 488 aa15.33■□□□□ 0.04
MSH6-203ENST00000420813 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.33■□□□□ 0.04
MSH6-203ENST00000420813 DTX2Q86UW9 622 aa15.33■□□□□ 0.04
MSH6-203ENST00000420813 CMIPQ8IY22 773 aa15.33■□□□□ 0.04
MSH6-203ENST00000420813 ARFGAP2Q8N6H7 521 aa15.33■□□□□ 0.04
MSH6-203ENST00000420813 ZNF433Q8N7K0 673 aaPredicted RBP15.33■□□□□ 0.04
MSH6-203ENST00000420813 APH1AQ96BI3 265 aa15.33■□□□□ 0.04
MSH6-203ENST00000420813 RADILQ96JH8 1075 aa15.33■□□□□ 0.04
MSH6-203ENST00000420813 TRAF4Q9BUZ4 470 aaPredicted RBP15.33■□□□□ 0.04
MSH6-203ENST00000420813 NUF2Q9BZD4 464 aa15.33■□□□□ 0.04
MSH6-203ENST00000420813 FAIMQ9NVQ4 179 aa15.33■□□□□ 0.04
MSH6-203ENST00000420813 NOSIPQ9Y314 301 aaKnown RBP15.33■□□□□ 0.04
MSH6-203ENST00000420813 ALPK2Q86TB3 2170 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 RTTNQ86VV8 2226 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 PRAMEF27A3QJZ7 478 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 SHISA9B4DS77 424 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 HMGN4O00479 90 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 BGNP21810 368 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 RYKP34925 604 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 CDKN1AP38936 164 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 ANXA11P50995 505 aaKnown RBP15.32■□□□□ 0.04
MSH6-203ENST00000420813 PLAURQ03405 335 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 CHRNEQ04844 493 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 KRTAP1-1Q07627 177 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 STX3Q13277 289 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 TNFAIP8L3Q5GJ75 292 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 ADGRG3Q86Y34 549 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 TRIML2Q8N7C3 387 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 ZG16BQ96DA0 208 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 ARL5BQ96KC2 179 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 TRNT1Q96Q11 434 aaKnown RBP15.32■□□□□ 0.04
MSH6-203ENST00000420813 SLCO5A1Q9H2Y9 848 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 ALG2Q9H553 416 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 CISD1Q9NZ45 108 aaKnown RBP15.32■□□□□ 0.04
MSH6-203ENST00000420813 NPAP1Q9NZP6 1156 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 MALT1Q9UDY8 824 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 TRAPPC4Q9Y296 219 aa15.32■□□□□ 0.04
MSH6-203ENST00000420813 ABCD4O14678 606 aa15.31■□□□□ 0.04
MSH6-203ENST00000420813 RAMP1O60894 148 aa15.31■□□□□ 0.04
MSH6-203ENST00000420813 MAP2K6P52564 334 aa15.31■□□□□ 0.04
MSH6-203ENST00000420813 LRRC74AQ0VAA2 488 aa15.31■□□□□ 0.04
MSH6-203ENST00000420813 DNM1P46Q6ZS02 220 aa15.31■□□□□ 0.04
MSH6-203ENST00000420813 UBE2J2Q8N2K1 259 aa15.31■□□□□ 0.04
MSH6-203ENST00000420813 PMM1Q92871 262 aa15.31■□□□□ 0.04
MSH6-203ENST00000420813 SLC38A1Q9H2H9 487 aa15.31■□□□□ 0.04
MSH6-203ENST00000420813 BARX1Q9HBU1 254 aaPredicted RBP15.31■□□□□ 0.04
MSH6-203ENST00000420813 AIG1Q9NVV5 245 aa15.31■□□□□ 0.04
MSH6-203ENST00000420813 TMEM181Q9P2C4 612 aa15.31■□□□□ 0.04
MSH6-203ENST00000420813 MGAT4BQ9UQ53 548 aa15.31■□□□□ 0.04
MSH6-203ENST00000420813 CIB4A0PJX0 185 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 AGAP5A6NIR3 686 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 CLDN24A6NM45 220 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 RNF223E7ERA6 249 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 FAAHO00519 579 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 ZNF208O43345 1280 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 ADAM11O75078 769 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 MRPL33O75394 65 aaKnown RBP15.3■□□□□ 0.04
MSH6-203ENST00000420813 RAD51DO75771 328 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 CD8AP01732 235 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 IGHV4-39P01824 125 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 ALDOCP09972 364 aaKnown RBP15.3■□□□□ 0.04
MSH6-203ENST00000420813 MAGEA8P43361 318 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 IDH2P48735 452 aaKnown RBP15.3■□□□□ 0.04
MSH6-203ENST00000420813 CDH11P55287 796 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 H3F3AP84243 136 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 FAPQ12884 760 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 MPP2Q14168 576 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 TMEM108Q6UXF1 575 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 LRRC74BQ6ZQY2 392 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 RNF130Q86XS8 419 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 CNOT9Q92600 299 aaKnown RBP15.3■□□□□ 0.04
MSH6-203ENST00000420813 TEX37Q96LM6 180 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 PANX1Q96RD7 426 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 REG4Q9BYZ8 158 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 OR11A1Q9GZK7 315 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 PNPOQ9NVS9 261 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 ASB6Q9NWX5 421 aa15.3■□□□□ 0.04
MSH6-203ENST00000420813 TAS2R16Q9NYV7 291 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms