RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 DSPPQ9NZW4 1301 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 UQCRHLA0A096LP55 91 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 C3orf80F5H4A9 247 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 SLCO1B7G3V0H7 640 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 SULT2B1O00204 365 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 KLF11O14901 512 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 SMPD2O60906 423 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 IDO1P14902 403 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 PAX1P15863 534 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 COX5AP20674 150 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 TXNL4AP83876 142 aaKnown RBP9.77□□□□□ -0.85
SSBP3-206ENST00000420121 H3F3AP84243 136 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 LRRC74AQ0VAA2 488 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 ITGADQ13349 1161 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 KRTAP21-3Q3LHN1 58 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 NCMAPQ5T1S8 102 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 ATG16L1Q676U5 607 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 DNAJC14Q6Y2X3 702 aaPredicted RBP9.77□□□□□ -0.85
SSBP3-206ENST00000420121 MTDHQ86UE4 582 aaKnown RBP9.77□□□□□ -0.85
SSBP3-206ENST00000420121 CMIPQ8IY22 773 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 CIARTQ8N365 385 aaPredicted RBP9.77□□□□□ -0.85
SSBP3-206ENST00000420121 TRIML2Q8N7C3 387 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 PIWIL2Q8TC59 973 aaKnown RBP9.77□□□□□ -0.85
SSBP3-206ENST00000420121 SLC25A43Q8WUT9 341 aaPredicted RBP9.77□□□□□ -0.85
SSBP3-206ENST00000420121 VPS33AQ96AX1 596 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 ARL8AQ96BM9 186 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 DNAJA3Q96EY1 480 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 C18orf12Q96KH6 178 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 TACO1Q9BSH4 297 aaKnown RBP9.77□□□□□ -0.85
SSBP3-206ENST00000420121 HDHD5Q9BXW7 423 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 RSPO3Q9BXY4 272 aaPredicted RBP9.77□□□□□ -0.85
SSBP3-206ENST00000420121 FANCFQ9NPI8 374 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 SERINC1Q9NRX5 453 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 ZIM2Q9NZV7 527 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 OSGIN1Q9UJX0 560 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 LIPT1Q9Y234 373 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 CHST2Q9Y4C5 530 aa9.77□□□□□ -0.85
SSBP3-206ENST00000420121 TMEM72A0PK05 275 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 ZC3H12DA2A288 527 aaKnown RBP9.76□□□□□ -0.85
SSBP3-206ENST00000420121 FAAHO00519 579 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 RFXANKO14593 260 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 HS3ST1O14792 307 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 SLC22A3O75751 556 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 PMS2P2O95744 297 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 IL6P05231 212 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 ZCCHC18P0CG32 403 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 IMPDH2P12268 514 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 ETFAP13804 333 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 IGHV1-2P23083 117 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 IDH2P48735 452 aaKnown RBP9.76□□□□□ -0.85
SSBP3-206ENST00000420121 SLC16A1P53985 500 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 NR1H2P55055 460 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 CSNK2A1P68400 391 aaPredicted RBP9.76□□□□□ -0.85
SSBP3-206ENST00000420121 EPS8Q12929 822 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 P2RY6Q15077 328 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 PDK3Q15120 406 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 GSTA3Q16772 222 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 MRPL2Q5T653 305 aaKnown RBP9.76□□□□□ -0.85
SSBP3-206ENST00000420121 NXNQ6DKJ4 435 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 ADAM5Q6NVV9 412 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 PRSS57Q6UWY2 283 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 ARFGAP2Q8N6H7 521 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 ZNF611Q8N823 705 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 ZNF563Q8TA94 476 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 WDR60Q8WVS4 1066 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 KISS1RQ969F8 398 aaPredicted RBP9.76□□□□□ -0.85
SSBP3-206ENST00000420121 AURKBQ96GD4 344 aaPredicted RBP9.76□□□□□ -0.85
SSBP3-206ENST00000420121 COX4I2Q96KJ9 171 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 GSX2Q9BZM3 304 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 MTHFD2LQ9H903 347 aaPredicted RBP9.76□□□□□ -0.85
SSBP3-206ENST00000420121 ZNF701Q9NV72 531 aaPredicted RBP9.76□□□□□ -0.85
SSBP3-206ENST00000420121 HDGFL3Q9Y3E1 203 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 CR1P17927 2039 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 CSPG4Q6UVK1 2322 aa9.76□□□□□ -0.85
SSBP3-206ENST00000420121 TMED7-TICAM2A0A0A6YYA0 188 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 CDHR4A6H8M9 788 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 DPRXA6NFQ7 191 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 ARHGEF9O43307 516 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 DNPH1O43598 174 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 LYZL6O75951 148 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 PGM3O95394 542 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 KRT75O95678 551 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 INHBBP09529 407 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 TFPTP0C1Z6 253 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 DANCRP0C864 163 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 NR2F1P10589 423 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 TFPIP10646 304 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 IL32P24001 234 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 TACR3P29371 465 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 ACAA2P42765 397 aaKnown RBP9.75□□□□□ -0.85
SSBP3-206ENST00000420121 MAGEA8P43361 318 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 PTH2RP49190 550 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 MRPL19P49406 292 aaKnown RBP9.75□□□□□ -0.85
SSBP3-206ENST00000420121 CLK1P49759 484 aaKnown RBP9.75□□□□□ -0.85
SSBP3-206ENST00000420121 FOXG1P55316 489 aaPredicted RBP9.75□□□□□ -0.85
SSBP3-206ENST00000420121 HPCAP84074 193 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 CAPRIN1Q14444 709 aaKnown RBP9.75□□□□□ -0.85
SSBP3-206ENST00000420121 AGBL2Q5U5Z8 902 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 EPGNQ6UW88 154 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 ZNF836Q6ZNA1 936 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms