RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 MEX3DQ86XN8 651 aaKnown RBP11.57□□□□□ -0.56
ATG4B-208ENST00000419606 PFN4Q8NHR9 129 aa11.57□□□□□ -0.56
ATG4B-208ENST00000419606 NEIL3Q8TAT5 605 aa11.57□□□□□ -0.56
ATG4B-208ENST00000419606 SMPDL3BQ92485 455 aa11.57□□□□□ -0.56
ATG4B-208ENST00000419606 PIGQQ9BRB3 760 aa11.57□□□□□ -0.56
ATG4B-208ENST00000419606 FUZQ9BT04 418 aa11.57□□□□□ -0.56
ATG4B-208ENST00000419606 POLR2J2Q9GZM3 115 aaKnown RBP11.57□□□□□ -0.56
ATG4B-208ENST00000419606 POLR2J3Q9H1A7 115 aaKnown RBP11.57□□□□□ -0.56
ATG4B-208ENST00000419606 SEMA6AQ9H2E6 1030 aa11.57□□□□□ -0.56
ATG4B-208ENST00000419606 LDAHQ9H6V9 325 aa11.57□□□□□ -0.56
ATG4B-208ENST00000419606 AGPAT4Q9NRZ5 378 aa11.57□□□□□ -0.56
ATG4B-208ENST00000419606 ZNF407Q9C0G0 2248 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 PRRC2CQ9Y520 2896 aaKnown RBP11.56□□□□□ -0.56
ATG4B-208ENST00000419606 A0A087WUU8 490 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 ELOA3DA6NLF2 546 aaPredicted RBP11.56□□□□□ -0.56
ATG4B-208ENST00000419606 H0YHG0 523 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 TNFRSF11BO00300 401 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 KPNA4O00629 521 aaPredicted RBP11.56□□□□□ -0.56
ATG4B-208ENST00000419606 GADD45GO95257 159 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 IGHG3P01860 377 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 CRYABP02511 175 aaKnown RBP11.56□□□□□ -0.56
ATG4B-208ENST00000419606 ZNF17P17021 662 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 BMP7P18075 431 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 CXCR1P25024 350 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 FASP25445 335 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 ADH6P28332 368 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 SFTPDP35247 375 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 APOBEC1P41238 236 aaKnown RBP11.56□□□□□ -0.56
ATG4B-208ENST00000419606 EIF1P41567 113 aaKnown RBP11.56□□□□□ -0.56
ATG4B-208ENST00000419606 HTR3AP46098 478 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 LIMS1P48059 325 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 CLDN15P56746 228 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 CLDN20P56880 219 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 EGR4Q05215 589 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 ST3GAL3Q11203 375 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 TRAM2Q15035 370 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 RCN1Q15293 331 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 ATP6AP1Q15904 470 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 ELOA3BQ3SY89 546 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 ANKRD34AQ69YU3 496 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 ZFP1Q6P2D0 407 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 AAGABQ6PD74 315 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 CHERPQ8IWX8 916 aaKnown RBP11.56□□□□□ -0.56
ATG4B-208ENST00000419606 HS3ST5Q8IZT8 346 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 ELOA3Q8NG57 546 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 OR4C15Q8NGM1 316 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 SLC7A13Q8TCU3 470 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 FAR1Q8WVX9 515 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 DNAJA4Q8WW22 397 aaPredicted RBP11.56□□□□□ -0.56
ATG4B-208ENST00000419606 NR4A3Q92570 626 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 STMN2Q93045 179 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 KTI12Q96EK9 354 aaPredicted RBP11.56□□□□□ -0.56
ATG4B-208ENST00000419606 EXO5Q9H790 373 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 YY1AP1Q9H869 796 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 MEPEQ9NQ76 525 aaPredicted RBP11.56□□□□□ -0.56
ATG4B-208ENST00000419606 SELENONQ9NZV5 590 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 NKX1-2Q9UD57 310 aaPredicted RBP11.56□□□□□ -0.56
ATG4B-208ENST00000419606 CHRNA9Q9UGM1 479 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 MAGED1Q9Y5V3 778 aaPredicted RBP11.56□□□□□ -0.56
ATG4B-208ENST00000419606 LYVE1Q9Y5Y7 322 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 MPDZO75970 2070 aa11.56□□□□□ -0.56
ATG4B-208ENST00000419606 A0A1B0GTH9 108 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 A0A1W2PNR3 127 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 A0A1W2PRQ8 180 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 TTLL8A6PVC2 850 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 LRRN3E7EW58 273 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 GNGT2O14610 69 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 BAG2O95816 211 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 LDLRP01130 860 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 PRB1P04280 392 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 THRBP10828 461 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 PNMTP11086 282 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 LHX2P50458 406 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 TDGF1P3P51864 188 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 SUCLG1P53597 346 aaKnown RBP11.55□□□□□ -0.56
ATG4B-208ENST00000419606 DGCR6Q14129 220 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 TMEM176BQ3YBM2 270 aaPredicted RBP11.55□□□□□ -0.56
ATG4B-208ENST00000419606 PRICKLE2Q7Z3G6 844 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 GGNQ86UU5 652 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 UBQLNLQ8IYU4 475 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 TMEM239Q8WW34 195 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 ABTB1Q969K4 478 aaPredicted RBP11.55□□□□□ -0.56
ATG4B-208ENST00000419606 ARL5BQ96KC2 179 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 GPR137Q96N19 417 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 ALPK1Q96QP1 1244 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 ZNF426Q9BUY5 554 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 REEP1Q9H902 201 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 C12orf10Q9HB07 376 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 PLSCR2Q9NRY7 297 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 DNAJB9Q9UBS3 223 aa11.55□□□□□ -0.56
ATG4B-208ENST00000419606 SAMHD1Q9Y3Z3 626 aaKnown RBP11.55□□□□□ -0.56
ATG4B-208ENST00000419606 A0A0J9YW62 118 aa11.54□□□□□ -0.56
ATG4B-208ENST00000419606 A0A1B0GVC2 190 aa11.54□□□□□ -0.56
ATG4B-208ENST00000419606 SH3PXD2BA1X283 911 aa11.54□□□□□ -0.56
ATG4B-208ENST00000419606 ADAMDEC1O15204 470 aa11.54□□□□□ -0.56
ATG4B-208ENST00000419606 SEC14L5O43304 696 aa11.54□□□□□ -0.56
ATG4B-208ENST00000419606 NPIPB7O75200 414 aa11.54□□□□□ -0.56
ATG4B-208ENST00000419606 DEAF1O75398 565 aaPredicted RBP11.54□□□□□ -0.56
ATG4B-208ENST00000419606 TFPIP10646 304 aa11.54□□□□□ -0.56
ATG4B-208ENST00000419606 IMPDH2P12268 514 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms