RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 TTC21BQ7Z4L5 1316 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 ANKRD63C9JTQ0 380 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 KIF2AO00139 706 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 XPO1O14980 1071 aaKnown RBP2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 CLDN3O15551 220 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 ADCY5O95622 1261 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 IGHV4-34P06331 123 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 TPSB2P20231 275 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 CYP2B6P20813 491 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 PSMA5P28066 241 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 NMT1P30419 496 aaKnown RBP2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 ATP5OP48047 213 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 CSNK1G2P78368 415 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 LRRC63Q05C16 580 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 RIPPLY1Q0D2K3 151 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 GPNMBQ14956 572 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 TPSAB1Q15661 275 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 NADK2Q4G0N4 442 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 ZNF311Q5JNZ3 666 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 CBLN3Q6UW01 205 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 APTXQ7Z2E3 356 aaKnown RBP2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 DPY19L4Q7Z388 723 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 TMEM17Q86X19 198 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 VRK2Q86Y07 508 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 ZNF679Q8IYX0 411 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 OR56B2PQ8NGI1 322 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 OR52K2Q8NGK3 314 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 TUBGCP3Q96CW5 907 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 PSKH2Q96QS6 385 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 GSDMCQ9BYG8 508 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 CRNKL1Q9BZJ0 848 aaKnown RBP2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 RIBC2Q9H4K1 309 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 VPS37BQ9H9H4 285 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 NMRK1Q9NWW6 199 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 WARS2Q9UGM6 360 aaKnown RBP2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 DCDC2Q9UHG0 476 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 MFHAS1Q9Y4C4 1052 aa2.67□□□□□ -1.98
HMGB1P49-201ENST00000418882 TRBV6-6A0A0A6YYG2 114 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 A0A1B0GUL7 405 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 CCDC169A6NNP5 214 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 KRTAP4-16G5E9R7 235 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 GFYI3L273 518 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 SGK1O00141 431 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 CTAGE5O15320 804 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 GMFGO60234 142 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 MTX2O75431 263 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 EPB41P11171 864 aaKnown RBP2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 DLSTP36957 453 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 LINC00315P59091 139 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 KRTAP10-1P60331 282 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 CCDC152Q4G0S7 254 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 ARSKQ6UWY0 536 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 ACP7Q6ZNF0 438 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 CENPUQ71F23 418 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 OTUD6BQ8N6M0 293 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 C15orf54Q8N8G6 183 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 OR8J1Q8NGP2 316 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 OR56B4Q8NH76 319 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 MARCH1Q8TCQ1 289 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 AKR1E2Q96JD6 320 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 PGLYRP4Q96LB8 373 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 TTC25Q96NG3 672 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 SECISBP2Q96T21 854 aaKnown RBP2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 CHRDL1Q9BU40 450 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 TPPP3Q9BW30 176 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 ZNF416Q9BWM5 594 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 GON7Q9BXV9 100 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 POLR1EQ9GZS1 481 aaKnown RBP2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 MEAF6Q9HAF1 191 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 DDX18Q9NVP1 670 aaKnown RBP2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 AIPL1Q9NZN9 384 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 ZNF225Q9UK10 706 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 RAB26Q9ULW5 256 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 TP53TG5Q9Y2B4 290 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 NEUROG3Q9Y4Z2 214 aa2.66□□□□□ -1.98
HMGB1P49-201ENST00000418882 IGLV3-16A0A075B6K0 115 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 XKRY2A2RUG3 117 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 FAM166BA8MTA8 275 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 MAGEB3O15480 346 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 FAM189A1O60320 539 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 SURF6O75683 361 aaKnown RBP2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 NEBLO76041 1014 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 GNA14O95837 355 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 LHX2P50458 406 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 NAPAP54920 295 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 MTTPP55157 894 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 BIDP55957 195 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 PRPS1P60891 318 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 SLC10A7Q0GE19 358 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 NSDHLQ15738 373 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 ZNF691Q5VV52 312 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 CCDC73Q6ZRK6 1079 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 ARCQ7LC44 396 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 ZDHHC21Q8IVQ6 265 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 FAM71E2Q8N5Q1 922 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 FADS6Q8N9I5 356 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 STEAP2Q8NFT2 490 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 AENQ8WTP8 325 aaKnown RBP2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 FAM151AQ8WW52 585 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 C4orf36Q96KX1 117 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms