RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 IL6P05231 212 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 RPLP0P05388 317 aaKnown RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 YES1P07947 543 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 SERPINF2P08697 491 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 RPS17P08708 135 aaKnown RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 FAM157CP0CG43 387 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 NCF1P14598 390 aaPredicted RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 CD1DP15813 335 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 EPCAMP16422 314 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 WARSP23381 471 aaKnown RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 IGFBP5P24593 272 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 RPS12P25398 132 aaKnown RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 ELK4P28324 431 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 ADORA2BP29275 332 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 ALDH4A1P30038 563 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 PKLRP30613 574 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 SHMT2P34897 504 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 SOX6P35712 828 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 NUDT1P36639 197 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 POLR2IP36954 125 aaKnown RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 DDOSTP39656 456 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 CASP3P42574 277 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 RPS5P46782 204 aaKnown RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 YAP1P46937 504 aaKnown RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 CLK1P49759 484 aaKnown RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 SERPINH1P50454 418 aaKnown RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 ZNF41P51814 821 aaPredicted RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 UGT2B15P54855 530 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 DAOAP59103 153 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 OSTNP61366 133 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 COPZ1P61923 177 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 SNRPD1P62314 119 aaKnown RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 SLC35A2P78381 396 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 IL5RAQ01344 420 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 EMX1Q04741 257 aaPredicted RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 ACVR1Q04771 509 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 RAD51Q06609 339 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 CD47Q08722 323 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 FCHO2Q0JRZ9 810 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 ELP6Q0PNE2 266 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 ADIGQ0VDE8 80 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 ABRQ12979 859 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 AQP6Q13520 282 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 CAPRIN1Q14444 709 aaKnown RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 POU6F1Q14863 301 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 TEAD2Q15562 447 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 NPTX1Q15818 432 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 ZBTB6Q15916 424 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 PPP1R3AQ16821 1122 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 HYAL4Q2M3T9 481 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 LRIT3Q3SXY7 679 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 ZFP69Q49AA0 526 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 VPS26BQ4G0F5 336 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 ATP6AP1LQ52LC2 224 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 PDLIM3Q53GG5 364 aaPredicted RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 UNC50Q53HI1 259 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 XKR7Q5GH72 579 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 PAGE2BQ5JRK9 111 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 SLC35D3Q5M8T2 416 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 SPANXN2Q5MJ10 180 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 CELF3Q5SZQ8 465 aaKnown RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 UBE2UQ5VVX9 321 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 AGAP6Q5VW22 663 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 MLIPQ5VWP3 458 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 RSBN1Q5VWQ0 802 aaPredicted RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 CAPN13Q6MZZ7 669 aaPredicted RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 NOTUMQ6P988 496 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 SHQ1Q6PI26 577 aaKnown RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 GSG1LQ6UXU4 331 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 CYHR1Q6ZMK1 362 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 MSANTD1Q6ZTZ1 278 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 TAS2R42Q7RTR8 314 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 HDDC2Q7Z4H3 204 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 ADCK2Q7Z695 626 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 MFSD6LQ8IWD5 586 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 MICU2Q8IYU8 434 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 PYROXD2Q8N2H3 581 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 TMEM86AQ8N2M4 240 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 ARL10Q8N8L6 244 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 BMPERQ8N8U9 685 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 C12orf29Q8N999 325 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 ASCC1Q8N9N2 400 aaKnown RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 ZNF248Q8NDW4 579 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 IPMKQ8NFU5 416 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 OR56A4Q8NGH8 313 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 OR9I1Q8NGQ6 314 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 OR13C3Q8NGS6 347 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 OR2T11Q8NH01 316 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 PSMA8Q8TAA3 256 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 VANGL1Q8TAA9 524 aaPredicted RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 C9orf43Q8TAL5 461 aaPredicted RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 SLC2A14Q8TDB8 520 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 MCOLN3Q8TDD5 553 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 ZFP90Q8TF47 636 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 CAPSLQ8WWF8 208 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 DYRK2Q92630 601 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 EXT2Q93063 718 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 MYDGFQ969H8 173 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 SLC38A4Q969I6 547 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 ISG20Q96AZ6 181 aaKnown RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms