RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 SYNGR4O95473 234 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 OPN1LWP04000 364 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 FREM3P0C091 2139 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 EDN3P14138 238 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 PTNP21246 168 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 FASP25445 335 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 PTGS2P35354 604 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 MAP2K6P52564 334 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 NUP107P57740 925 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 RAC1P63000 192 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 HSF1Q00613 529 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 IL1RL1Q01638 556 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 PLAURQ03405 335 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 SF3B4Q15427 424 aaKnown RBP eCLIP7.65□□□□□ -1.18
TRIM48-201ENST00000417545 TAF11Q15544 211 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 TMEM176BQ3YBM2 270 aaPredicted RBP7.65□□□□□ -1.18
TRIM48-201ENST00000417545 SYT14P1Q58G82 188 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 DCST1Q5T197 706 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 OR2T5Q6IEZ7 315 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 PCSK4Q6UW60 755 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 C5orf46Q6UWT4 87 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 P4HA3Q7Z4N8 544 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 GDF7Q7Z4P5 450 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 ATCAYQ86WG3 371 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 OFCC1Q8IZS5 231 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 OR2T29Q8NH02 315 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 OR52J3Q8NH60 311 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 PYDC1Q8WXC3 89 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 KLHL15Q96M94 604 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 HS6ST2Q96MM7 605 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 KLHL4Q9C0H6 718 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 DENND2DQ9H6A0 471 aaPredicted RBP7.65□□□□□ -1.18
TRIM48-201ENST00000417545 C12orf10Q9HB07 376 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 NDUFAF4Q9P032 175 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 MED31Q9Y3C7 131 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 ZNF337Q9Y3M9 751 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 AP4B1Q9Y6B7 739 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 TPRP12270 2363 aaKnown RBP7.65□□□□□ -1.19
TRIM48-201ENST00000417545 PCNX3Q9H6A9 2034 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 TMEM72A0PK05 275 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 OR14I1A6ND48 311 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 FIGNL2A6NMB9 653 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 SULT2B1O00204 365 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 ADAM11O75078 769 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 ENTPD5O75356 428 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 BAG2O95816 211 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 LDLRP01130 860 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 IGHG3P01860 377 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 HIST1H2ABP04908 130 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 BMP7P18075 431 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 MST1P26927 711 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 IDUAP35475 653 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 IFNGR2P38484 337 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 EIF1AXP47813 144 aaKnown RBP7.64□□□□□ -1.19
TRIM48-201ENST00000417545 STARP49675 285 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 OR2B6P58173 313 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 CSNK2A1P68400 391 aaPredicted RBP7.64□□□□□ -1.19
TRIM48-201ENST00000417545 SLC25A53Q5H9E4 307 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 HBMQ6B0K9 141 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 ZNF585AQ6P3V2 769 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 HIST3H2AQ7L7L0 130 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 PIWIL3Q7Z3Z3 882 aaKnown RBP7.64□□□□□ -1.19
TRIM48-201ENST00000417545 ATG4DQ86TL0 474 aaPredicted RBP7.64□□□□□ -1.19
TRIM48-201ENST00000417545 SIAH3Q8IW03 269 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 OR5M9Q8NGP3 310 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 PIGXQ8TBF5 258 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 POC1BQ8TC44 478 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 TMEM239Q8WW34 195 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 HIST1H2ACQ93077 130 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 SLC25A36Q96CQ1 311 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 NTNG2Q96CW9 530 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 DNAJA3Q96EY1 480 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 KLHDC3Q9BQ90 382 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 WFDC6Q9BQY6 131 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 BDH2Q9BUT1 245 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 NDEL1Q9GZM8 345 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 ADAM19Q9H013 955 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 ANKRD19PQ9H560 264 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 NMNAT1Q9HAN9 279 aaPredicted RBP7.64□□□□□ -1.19
TRIM48-201ENST00000417545 CCM2LQ9NUG4 571 aaPredicted RBP7.64□□□□□ -1.19
TRIM48-201ENST00000417545 PAQR5Q9NXK6 330 aaPredicted RBP7.64□□□□□ -1.19
TRIM48-201ENST00000417545 KIF17Q9P2E2 1029 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 TNFRSF10DQ9UBN6 386 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 SH3BGRL2Q9UJC5 107 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 MCTS1Q9ULC4 181 aaKnown RBP7.64□□□□□ -1.19
TRIM48-201ENST00000417545 A4GNTQ9UNA3 340 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 SAMHD1Q9Y3Z3 626 aaKnown RBP7.64□□□□□ -1.19
TRIM48-201ENST00000417545 U3KQV3 271 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 CACNA1BQ00975 2339 aa7.64□□□□□ -1.19
TRIM48-201ENST00000417545 MGAQ8IWI9 3026 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 TRAV36DV7A0A075B6V5 113 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 A0A087WUJ7 227 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 A0A1W2PNR3 127 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 TMEM229AB2RXF0 380 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 B4DXG7 233 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 TNFSF11O14788 317 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 CLOCKO15516 846 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 ZNF208O43345 1280 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 OR2T1O43869 369 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 OR10H3O60404 316 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms