RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 PSME3P61289 254 aa13.14□□□□□ -0.31
LIMS1-206ENST00000414829 MXRA7P84157 204 aa13.14□□□□□ -0.31
LIMS1-206ENST00000414829 LIPEQ05469 1076 aa13.14□□□□□ -0.31
LIMS1-206ENST00000414829 C6orf89Q6UWU4 347 aa13.14□□□□□ -0.31
LIMS1-206ENST00000414829 NCCRP1Q6ZVX7 275 aaPredicted RBP13.14□□□□□ -0.31
LIMS1-206ENST00000414829 CCDC71Q8IV32 467 aaPredicted RBP13.14□□□□□ -0.31
LIMS1-206ENST00000414829 ATP6V1C2Q8NEY4 427 aa13.14□□□□□ -0.31
LIMS1-206ENST00000414829 OR52E4Q8NGH9 312 aa13.14□□□□□ -0.31
LIMS1-206ENST00000414829 GMPPAQ96IJ6 420 aaPredicted RBP13.14□□□□□ -0.31
LIMS1-206ENST00000414829 POLR2J2Q9GZM3 115 aaKnown RBP13.14□□□□□ -0.31
LIMS1-206ENST00000414829 ADAM19Q9H013 955 aa13.14□□□□□ -0.31
LIMS1-206ENST00000414829 POLR2J3Q9H1A7 115 aaKnown RBP13.14□□□□□ -0.31
LIMS1-206ENST00000414829 PIF1Q9H611 641 aa13.14□□□□□ -0.31
LIMS1-206ENST00000414829 FANCFQ9NPI8 374 aa13.14□□□□□ -0.31
LIMS1-206ENST00000414829 ADPRHL2Q9NX46 363 aa13.14□□□□□ -0.31
LIMS1-206ENST00000414829 KLHL9Q9P2J3 617 aa13.14□□□□□ -0.31
LIMS1-206ENST00000414829 OSGIN1Q9UJX0 560 aa13.14□□□□□ -0.31
LIMS1-206ENST00000414829 PACSIN3Q9UKS6 424 aa13.14□□□□□ -0.31
LIMS1-206ENST00000414829 TMED7Q9Y3B3 224 aa13.14□□□□□ -0.31
LIMS1-206ENST00000414829 BAHCC1Q9P281 2608 aa13.14□□□□□ -0.31
LIMS1-206ENST00000414829 TENM4Q6N022 2769 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 CCT8L1PA6NM43 557 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 H0YC42 278 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 SULT2B1O00204 365 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 ADAM11O75078 769 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 TOXO94900 526 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 LGI1O95970 557 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 BMP5P22003 454 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 CALB2P22676 271 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 IFNA8P32881 189 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 ASCL1P50553 236 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 ZNF136P52737 540 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 TPD52P55327 224 aaPredicted RBP13.13□□□□□ -0.31
LIMS1-206ENST00000414829 CTBP2P56545 445 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 DMTNQ08495 405 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 LRRC23Q53EV4 343 aaPredicted RBP13.13□□□□□ -0.31
LIMS1-206ENST00000414829 SAMD4BQ5PRF9 694 aaKnown RBP13.13□□□□□ -0.31
LIMS1-206ENST00000414829 ZNF613Q6PF04 617 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 ULK3Q6PHR2 472 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 TMPPEQ6ZT21 453 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 SMYD1Q8NB12 490 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 STK35Q8TDR2 534 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 RNF128Q8TEB7 428 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 FIG4Q92562 907 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 TAMM41Q96BW9 452 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 INTS12Q96CB8 462 aaKnown RBP13.13□□□□□ -0.31
LIMS1-206ENST00000414829 ZNF845Q96IR2 970 aaPredicted RBP13.13□□□□□ -0.31
LIMS1-206ENST00000414829 NPAS1Q99742 590 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 POTEKPQ9BYX7 375 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 COQ10BQ9H8M1 238 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 CMTM6Q9NX76 183 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 ADA2Q9NZK5 511 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 TRAPPC4Q9Y296 219 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 CHST2Q9Y4C5 530 aa13.13□□□□□ -0.31
LIMS1-206ENST00000414829 A0A1W2PNV4 684 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 ELOA3DA6NLF2 546 aaPredicted RBP13.12□□□□□ -0.31
LIMS1-206ENST00000414829 A8MVM7 634 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 EEF1E1-BLOC1S5C9J1V9 151 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 NME4O00746 187 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 EEF1E1O43324 174 aaKnown RBP13.12□□□□□ -0.31
LIMS1-206ENST00000414829 SS18L1O75177 396 aaPredicted RBP13.12□□□□□ -0.31
LIMS1-206ENST00000414829 CLDN1O95832 211 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 TGM6O95932 706 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 OPN1SWP03999 348 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 IL11P20809 199 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 ENPP1P22413 925 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 KDELR2P33947 212 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 DIO1P49895 249 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 NRF1Q16656 503 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 ELOA3BQ3SY89 546 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 FBXL19-AS1Q494R0 122 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 ALG10BQ5I7T1 473 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 FCRLAQ7L513 359 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 FAM214BQ7L5A3 538 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 ADGRG3Q86Y34 549 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 GCNT2Q8N0V5 402 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 ARHGAP24Q8N264 748 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 NAXEQ8NCW5 288 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 ELOA3Q8NG57 546 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 PIGXQ8TBF5 258 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 C3orf49Q96BT1 292 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 SLC47A1Q96FL8 570 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 EPYCQ99645 322 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 ARHGDIGQ99819 225 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 TAPBPLQ9BX59 468 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 EMC3Q9P0I2 261 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 TMEM181Q9P2C4 612 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 FLNCQ14315 2725 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 COL12A1Q99715 3063 aa13.12□□□□□ -0.31
LIMS1-206ENST00000414829 MSTNO14793 375 aa13.11□□□□□ -0.31
LIMS1-206ENST00000414829 EFNA2O43921 213 aa13.11□□□□□ -0.31
LIMS1-206ENST00000414829 AHSA1O95433 338 aa13.11□□□□□ -0.31
LIMS1-206ENST00000414829 GPIP06744 558 aa13.11□□□□□ -0.31
LIMS1-206ENST00000414829 FESP07332 822 aa13.11□□□□□ -0.31
LIMS1-206ENST00000414829 PRG2P13727 222 aa13.11□□□□□ -0.31
LIMS1-206ENST00000414829 CD247P20963 164 aa13.11□□□□□ -0.31
LIMS1-206ENST00000414829 SHC1P29353 583 aa13.11□□□□□ -0.31
LIMS1-206ENST00000414829 IDUAP35475 653 aa13.11□□□□□ -0.31
LIMS1-206ENST00000414829 CPA2P48052 419 aa13.11□□□□□ -0.31
LIMS1-206ENST00000414829 GSK3BP49841 420 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms