RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 CCNOP22674 350 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 PRDX3P30048 256 aaKnown RBP8.68□□□□□ -1.02
SNHG3-201ENST00000413987 SLC19A1P41440 591 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 SLC6A9P48067 706 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 TIAL1Q01085 375 aaKnown RBP eCLIP8.68□□□□□ -1.025e-7■■□□□ 14.4
SNHG3-201ENST00000413987 ACSM1Q08AH1 577 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 SCRN3Q0VDG4 424 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 BAMBIQ13145 260 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 IQCCQ4KMZ1 466 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 PDZK1Q5T2W1 519 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 PRAMEF5Q5TYX0 476 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 PRAMEF9Q5VWM5 478 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 PRAMEF6Q5VXH4 476 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 PLET1Q6UQ28 207 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 Q6ZS52 159 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 CCDC71Q8IV32 467 aaPredicted RBP8.68□□□□□ -1.02
SNHG3-201ENST00000413987 LRRC56Q8IYG6 542 aaPredicted RBP8.68□□□□□ -1.02
SNHG3-201ENST00000413987 TMEM132CQ8N3T6 1108 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 SLC25A36Q96CQ1 311 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 REPS1Q96D71 796 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 DPY30Q9C005 99 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 RNF167Q9H6Y7 350 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 MRPS30Q9NP92 439 aaKnown RBP8.68□□□□□ -1.02
SNHG3-201ENST00000413987 NLE1Q9NVX2 485 aaPredicted RBP8.68□□□□□ -1.02
SNHG3-201ENST00000413987 C2orf42Q9NWW7 574 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 CNOT2Q9NZN8 540 aaKnown RBP8.68□□□□□ -1.02
SNHG3-201ENST00000413987 SEMA5BQ9P283 1151 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 ONECUT1Q9UBC0 465 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 MGAT4BQ9UQ53 548 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 ENTPD4Q9Y227 616 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 DTX4Q9Y2E6 619 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 CMAHPQ9Y471 501 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 POLR3HQ9Y535 204 aaPredicted RBP8.68□□□□□ -1.02
SNHG3-201ENST00000413987 IQCMA0A1B0GVH7 501 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 GAPDHSO14556 408 aaPredicted RBP8.68□□□□□ -1.02
SNHG3-201ENST00000413987 CER1O95813 267 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 C9P02748 559 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 KIR3DL2P43630 455 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 SLC6A12P48065 614 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 GNG10P50151 68 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 GZMMP51124 257 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 PSPHP78330 225 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 POU6F2P78424 691 aaPredicted RBP8.68□□□□□ -1.02
SNHG3-201ENST00000413987 ACVR1Q04771 509 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 TMEM196Q5HYL7 178 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 PXDC1Q5TGL8 231 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 TMEM182Q6ZP80 229 aaPredicted RBP8.68□□□□□ -1.02
SNHG3-201ENST00000413987 TPRG1Q6ZUI0 275 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 HSD11B1LQ7Z5J1 315 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 LUZP2Q86TE4 346 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 FAM58AQ8N1B3 248 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 KLHL36Q8N4N3 616 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 GPR26Q8NDV2 337 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 OR10Z1Q8NGY1 313 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 GLYATL2Q8WU03 294 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 OIT3Q8WWZ8 545 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 SCAMP4Q969E2 229 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 ADIPOR1Q96A54 375 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 FUBP1Q96AE4 644 aaKnown RBP8.68□□□□□ -1.02
SNHG3-201ENST00000413987 ULK4Q96C45 1275 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 SCRN2Q96FV2 425 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 FAM110AQ9BQ89 295 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 CDCA4Q9BXL8 241 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 ASPNQ9BXN1 380 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 TMEM185BQ9H7F4 350 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 TIGARQ9NQ88 270 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 SLC25A37Q9NYZ2 338 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 IL17CQ9P0M4 197 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 GALPQ9UBC7 116 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 DOCK9Q9BZ29 2069 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 SCN8AQ9UQD0 1980 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 A0A087WWL8 130 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 TRBV5-3A0A0A0MS03 114 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 C13orf42A0A1B0GVH6 325 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 OR2W5A6NFC9 320 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 F2RL2O00254 374 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 ABCD4O14678 606 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 MID1O15344 667 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 RGS14O43566 566 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 CYP7B1O75881 506 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 PRAMEF1O95521 474 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 ZNF682O95780 498 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 GNSP15586 552 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 DGKAP23743 735 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 ELAVL3Q14576 367 aaKnown RBP8.67□□□□□ -1.02
SNHG3-201ENST00000413987 TAB1Q15750 504 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 ZNF79Q15937 498 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 PCK2Q16822 640 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 TTLL9Q3SXZ7 439 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 FAM174BQ3ZCQ3 159 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 SOWAHCQ53LP3 525 aaPredicted RBP8.67□□□□□ -1.02
SNHG3-201ENST00000413987 LRIF1Q5T3J3 769 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 FCRL6Q6DN72 434 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 MSRB3Q8IXL7 192 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 OR4M1Q8NGD0 313 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 OR4L1Q8NH43 312 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 RPLP0P6Q8NHW5 317 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 GPR151Q8TDV0 419 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 GPX8Q8TED1 209 aa8.67□□□□□ -1.02
SNHG3-201ENST00000413987 UBE2FQ969M7 185 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms