RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 C10orf90Q96M02 699 aa12.84□□□□□ -0.35
SMARCA4-202ENST00000413806 C12orf57Q99622 126 aa12.84□□□□□ -0.35
SMARCA4-202ENST00000413806 HRH3Q9Y5N1 445 aa12.84□□□□□ -0.35
SMARCA4-202ENST00000413806 CCDC163A0A0D9SF12 145 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 SMLR1H3BR10 107 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 SRPX2O60687 465 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 TP53P04637 393 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 CD53P19397 219 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 ZNF91Q05481 1191 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 VRK2Q86Y07 508 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 LACC1Q8IV20 430 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 MRPL43Q8N983 215 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 SYNPRQ8TBG9 265 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 TOX2Q96NM4 488 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 CNTNAP3Q9BZ76 1288 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 INIPQ9NRY2 104 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 USP36Q9P275 1121 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 LRP5O75197 1615 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 SLC2A5P22732 501 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 C21orf33P30042 268 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 SORDQ00796 357 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 MEF2DQ14814 521 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 EEF1A1P5Q5VTE0 462 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 ZNF546Q86UE3 836 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 MCATQ8IVS2 390 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 ZNF679Q8IYX0 411 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 CADM3Q8N126 398 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 ST8SIA4Q92187 359 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 C4orf36Q96KX1 117 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 PLCXD1Q9NUJ7 323 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 CBLCQ9ULV8 474 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 A0A1W2PS29 197 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 RAB3DO95716 219 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 LAMB1P07942 1786 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 IMPA1P29218 277 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 SYPL1Q16563 259 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 NKPD1Q17RQ9 610 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 LINC01465Q8N7H1 131 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 OR13F1Q8NGS4 319 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 KHSRPQ92945 711 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 SPATA6Q9NWH7 488 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 A0A0A6YYC8 382 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 I3L1I5 382 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 GPR75O95800 540 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 BEX5Q5H9J7 111 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 SBSNQ6UWP8 590 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 EPHX3Q9H6B9 360 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 PSORS1C1Q9UIG5 152 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 SRPK3Q9UPE1 567 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 V9GY05 133 aa12.83□□□□□ -0.36
SMARCA4-202ENST00000413806 AP1G1O43747 822 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 UBE2KP61086 200 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 RPS15P62841 145 aaKnown RBP12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 RACK1P63244 317 aaKnown RBP12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 DEFB103AP81534 67 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 C3orf38Q5JPI3 329 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 TMEM244Q5VVB8 128 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 PRAMEF8Q5VWM4 474 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 PRAMEF7Q5VXH5 474 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 Q6ZSR9 355 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 FAM122BQ7Z309 247 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 ZNF761Q86XN6 746 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 OR2A12Q8NGT7 310 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 SMAP2Q8WU79 429 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 TAAR8Q969N4 342 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 KCMF1Q9P0J7 381 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 FTSJ1Q9UET6 329 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 ATXN7L1Q9ULK2 861 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 NRAPQ86VF7 1730 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 SDC3O75056 442 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 IFNGR1P15260 489 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 ZNF26P17031 533 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 GABRA5P31644 462 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 DCAF7P61962 342 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 CSNK2A1P68400 391 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 REEP5Q00765 189 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 CSNK2A3Q8NEV1 391 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 STEAP2Q8NFT2 490 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 NANOS1Q8WY41 292 aaKnown RBP12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 SLAMF9Q96A28 289 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 KCTD12Q96CX2 325 aaKnown RBP12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 NKX6-2Q9C056 277 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 A4GALTQ9NPC4 353 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 SMCO4Q9NRQ5 59 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 CA14Q9ULX7 337 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 GGT3PA6NGU5 568 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 A8MXE2 369 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 J3KTA2 159 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 CTDSP2O14595 271 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 AIFM1O95831 613 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 GIPRP48546 466 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 RNF4P78317 190 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 SLCO4C1Q6ZQN7 724 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 IL17RCQ8NAC3 791 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 ASB17Q8WXJ9 295 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 KLK4Q9Y5K2 254 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 NPIPA5A0A0B4J1W7 369 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 PRICKLE3O43900 615 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 TMEM225BP0DP42 221 aa12.82□□□□□ -0.36
SMARCA4-202ENST00000413806 NFYAP23511 347 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms