RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 EPS8Q12929 822 aa13.98□□□□□ -0.17
MCF2L-211ENST00000413354 POU4F3Q15319 338 aa13.98□□□□□ -0.17
MCF2L-211ENST00000413354 AGKQ53H12 422 aa13.98□□□□□ -0.17
MCF2L-211ENST00000413354 TFAP2EQ6VUC0 442 aa13.98□□□□□ -0.17
MCF2L-211ENST00000413354 STAC2Q6ZMT1 411 aa13.98□□□□□ -0.17
MCF2L-211ENST00000413354 ZNF550Q7Z398 422 aa13.98□□□□□ -0.17
MCF2L-211ENST00000413354 FUNDC1Q8IVP5 155 aa13.98□□□□□ -0.17
MCF2L-211ENST00000413354 BBS10Q8TAM1 723 aa13.98□□□□□ -0.17
MCF2L-211ENST00000413354 DDIT4LQ96D03 193 aa13.98□□□□□ -0.17
MCF2L-211ENST00000413354 FOXC2Q99958 501 aa13.98□□□□□ -0.17
MCF2L-211ENST00000413354 PSD2Q9BQI7 771 aa13.98□□□□□ -0.17
MCF2L-211ENST00000413354 A4GALTQ9NPC4 353 aa13.98□□□□□ -0.17
MCF2L-211ENST00000413354 EMC3Q9P0I2 261 aa13.98□□□□□ -0.17
MCF2L-211ENST00000413354 ZNF443Q9Y2A4 671 aaPredicted RBP13.98□□□□□ -0.17
MCF2L-211ENST00000413354 GPR52Q9Y2T5 361 aa13.98□□□□□ -0.17
MCF2L-211ENST00000413354 AKAP9Q99996 3911 aa13.97□□□□□ -0.17
MCF2L-211ENST00000413354 IGHV3-15A0A0B4J1V0 119 aa13.97□□□□□ -0.17
MCF2L-211ENST00000413354 CDHR4A6H8M9 788 aa13.97□□□□□ -0.17
MCF2L-211ENST00000413354 ZNF724A8MTY0 619 aa13.97□□□□□ -0.17
MCF2L-211ENST00000413354 AP3D1O14617 1153 aa13.97□□□□□ -0.17
MCF2L-211ENST00000413354 SMAD9O15198 467 aaKnown RBP13.97□□□□□ -0.17
MCF2L-211ENST00000413354 ZNF208O43345 1280 aa13.97□□□□□ -0.17
MCF2L-211ENST00000413354 EDF1O60869 148 aaKnown RBP13.97□□□□□ -0.17
MCF2L-211ENST00000413354 HOXB9P17482 250 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-211ENST00000413354 PSMB1P20618 241 aaKnown RBP13.97□□□□□ -0.17
MCF2L-211ENST00000413354 COPZ1P61923 177 aa13.97□□□□□ -0.17
MCF2L-211ENST00000413354 MAPK11Q15759 364 aa13.97□□□□□ -0.17
MCF2L-211ENST00000413354 ZNF836Q6ZNA1 936 aa13.97□□□□□ -0.17
MCF2L-211ENST00000413354 VRK2Q86Y07 508 aa13.97□□□□□ -0.17
MCF2L-211ENST00000413354 STEAP2Q8NFT2 490 aa13.97□□□□□ -0.17
MCF2L-211ENST00000413354 PIGXQ8TBF5 258 aa13.97□□□□□ -0.17
MCF2L-211ENST00000413354 SPATA9Q9BWV2 254 aa13.97□□□□□ -0.17
MCF2L-211ENST00000413354 HDHD5Q9BXW7 423 aa13.97□□□□□ -0.17
MCF2L-211ENST00000413354 PLEKHF2Q9H8W4 249 aa13.97□□□□□ -0.17
MCF2L-211ENST00000413354 BCL2L10Q9HD36 194 aa13.97□□□□□ -0.17
MCF2L-211ENST00000413354 CCM2LQ9NUG4 571 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-211ENST00000413354 PLEKHA6Q9Y2H5 1048 aa13.97□□□□□ -0.17
MCF2L-211ENST00000413354 PRRC2AP48634 2157 aaKnown RBP13.97□□□□□ -0.17
MCF2L-211ENST00000413354 TMED7-TICAM2A0A0A6YYA0 188 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 A0A1W2PP18 115 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 ADAM11O75078 769 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 NCF2P19878 526 aaPredicted RBP13.96□□□□□ -0.17
MCF2L-211ENST00000413354 TACR3P29371 465 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 KEAP1Q14145 624 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 PDK3Q15120 406 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 RPS26P11Q5JNZ5 115 aaPredicted RBP13.96□□□□□ -0.17
MCF2L-211ENST00000413354 GCNT6Q5T4J0 391 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 ABLIM2Q6H8Q1 611 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 NUFIP2Q7Z417 695 aaKnown RBP13.96□□□□□ -0.17
MCF2L-211ENST00000413354 MTDHQ86UE4 582 aaKnown RBP13.96□□□□□ -0.17
MCF2L-211ENST00000413354 ADGRG3Q86Y34 549 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 SLC35B4Q969S0 331 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 MBD6Q96DN6 1003 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 ZC3HAV1LQ96H79 300 aaKnown RBP13.96□□□□□ -0.17
MCF2L-211ENST00000413354 USB1Q9BQ65 265 aaKnown RBP13.96□□□□□ -0.17
MCF2L-211ENST00000413354 ACTR6Q9GZN1 396 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 LIME1Q9H400 295 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 NPHS2Q9NP85 383 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 MRGBPQ9NV56 204 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 C6orf203Q9P0P8 240 aaPredicted RBP13.96□□□□□ -0.17
MCF2L-211ENST00000413354 TMEM181Q9P2C4 612 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.96□□□□□ -0.17
MCF2L-211ENST00000413354 LEF1Q9UJU2 399 aaPredicted RBP13.96□□□□□ -0.17
MCF2L-211ENST00000413354 DCTN4Q9UJW0 460 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 OSGIN1Q9UJX0 560 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 TRAPPC4Q9Y296 219 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 TMED7Q9Y3B3 224 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 GMEB1Q9Y692 573 aa13.96□□□□□ -0.17
MCF2L-211ENST00000413354 DEFB108AA8MXU0 73 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 EVPLLA8MZ36 301 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 GPR171O14626 319 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 EIF1BO60739 113 aaKnown RBP13.95□□□□□ -0.18
MCF2L-211ENST00000413354 ARAFP10398 606 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 ETS2P15036 469 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 IL32P24001 234 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 OR3A2P47893 321 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 SLC35A1P78382 337 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 P2RY6Q15077 328 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 BEX5Q5H9J7 111 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 ZNF311Q5JNZ3 666 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 PAGE3Q5JUK9 113 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 ANKRD34AQ69YU3 496 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 WBP2NLQ6ICG8 309 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 GALNT5Q7Z7M9 940 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 KRT73Q86Y46 540 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 GABRG1Q8N1C3 465 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 PIK3IP1Q96FE7 263 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 ARL5BQ96KC2 179 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 ALPK1Q96QP1 1244 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 SPATA5L1Q9BVQ7 753 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 OR11A1Q9GZK7 315 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 CXXC4Q9H2H0 198 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 SLC52A3Q9NQ40 469 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 RLIMQ9NVW2 624 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 SLC25A37Q9NYZ2 338 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 VAPAQ9P0L0 249 aa13.95□□□□□ -0.18
MCF2L-211ENST00000413354 IGKV3D-15A0A087WSY6 115 aa13.94□□□□□ -0.18
MCF2L-211ENST00000413354 TRBV5-3A0A0A0MS03 114 aa13.94□□□□□ -0.18
MCF2L-211ENST00000413354 A0A0G2JND7 137 aa13.94□□□□□ -0.18
MCF2L-211ENST00000413354 TMEM72A0PK05 275 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms