RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 C14orf79Q96F83 325 aa11.73□□□□□ -0.53
SSB-203ENST00000413002 GMPPAQ96IJ6 420 aaPredicted RBP11.73□□□□□ -0.53
SSB-203ENST00000413002 PRR14Q9BWN1 585 aa11.73□□□□□ -0.53
SSB-203ENST00000413002 SPATA9Q9BWV2 254 aa11.73□□□□□ -0.53
SSB-203ENST00000413002 CACYBPQ9HB71 228 aaKnown RBP11.73□□□□□ -0.53
SSB-203ENST00000413002 TIGARQ9NQ88 270 aa11.73□□□□□ -0.53
SSB-203ENST00000413002 KCNN3Q9UGI6 736 aa11.73□□□□□ -0.53
SSB-203ENST00000413002 CHRNA9Q9UGM1 479 aa11.73□□□□□ -0.53
SSB-203ENST00000413002 EMC9Q9Y3B6 208 aa11.73□□□□□ -0.53
SSB-203ENST00000413002 ZC3H12DA2A288 527 aaKnown RBP11.72□□□□□ -0.53
SSB-203ENST00000413002 SULT2B1O00204 365 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 MRASO14807 208 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 SMAD9O15198 467 aaKnown RBP11.72□□□□□ -0.53
SSB-203ENST00000413002 SS18L1O75177 396 aaPredicted RBP11.72□□□□□ -0.53
SSB-203ENST00000413002 FESP07332 822 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 THBS1P07996 1170 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 SLC6A2P23975 617 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 AGTR1P30556 359 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 SLC1A3P43003 542 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 POLR2HP52434 150 aaKnown RBP11.72□□□□□ -0.53
SSB-203ENST00000413002 RAC3P60763 192 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 CYP51A1Q16850 503 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 MMEL1Q495T6 779 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 RABL3Q5HYI8 236 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 RNF220Q5VTB9 566 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 ANKRD34AQ69YU3 496 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 REP15Q6BDI9 236 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 TMPPEQ6ZT21 453 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.72□□□□□ -0.53
SSB-203ENST00000413002 TMEM200AQ86VY9 491 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 KIF18BQ86Y91 864 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 OR10A6Q8NH74 314 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 TSPEARQ8WU66 669 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 NRGNQ92686 78 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 LURAP1Q96LR2 239 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 ELAC2Q9BQ52 826 aaKnown RBP11.72□□□□□ -0.53
SSB-203ENST00000413002 WFDC6Q9BQY6 131 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 TMEM38AQ9H6F2 299 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 MCCC2Q9HCC0 563 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 FOXD3Q9UJU5 478 aaPredicted RBP11.72□□□□□ -0.53
SSB-203ENST00000413002 USP22Q9UPT9 525 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 CORO2BQ9UQ03 480 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 IFT52Q9Y366 437 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 GMEB1Q9Y692 573 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 CAPN7Q9Y6W3 813 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 PDZD2O15018 2839 aa11.72□□□□□ -0.53
SSB-203ENST00000413002 ANKHD1Q8IWZ3 2542 aaKnown RBP11.71□□□□□ -0.53
SSB-203ENST00000413002 ZNF814B7Z6K7 855 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 FXYD1O00168 92 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 RAMP1O60894 148 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 GCM2O75603 506 aaPredicted RBP11.71□□□□□ -0.53
SSB-203ENST00000413002 PRKD3O94806 890 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 OPN1SWP03999 348 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 CD8BP10966 210 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 POU2F1P14859 743 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 ETS2P15036 469 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 OR2B6P58173 313 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 DMTNQ08495 405 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 TRMT5Q32P41 509 aaKnown RBP11.71□□□□□ -0.53
SSB-203ENST00000413002 EEF1A1P5Q5VTE0 462 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 PRAMEF8Q5VWM4 474 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 PRAMEF7Q5VXH5 474 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 NANOGP8Q6NSW7 305 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 ZNF550Q7Z398 422 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 CCDC103Q8IW40 242 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 ZNF440Q8IYI8 595 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 SMYD1Q8NB12 490 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 OR6K3Q8NGY3 331 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 SLC25A43Q8WUT9 341 aaPredicted RBP11.71□□□□□ -0.53
SSB-203ENST00000413002 ZNF300Q96RE9 604 aaPredicted RBP11.71□□□□□ -0.53
SSB-203ENST00000413002 GPATCH1Q9BRR8 931 aaKnown RBP11.71□□□□□ -0.53
SSB-203ENST00000413002 KLHL4Q9C0H6 718 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 ADAM19Q9H013 955 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 KAT8Q9H7Z6 458 aaKnown RBP11.71□□□□□ -0.53
SSB-203ENST00000413002 NANOGQ9H9S0 305 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 PLSCR4Q9NRQ2 329 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 KLHL28Q9NXS3 571 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 KLHL13Q9P2N7 655 aa11.71□□□□□ -0.53
SSB-203ENST00000413002 ING1Q9UK53 422 aaPredicted RBP11.71□□□□□ -0.53
SSB-203ENST00000413002 CSMD1Q96PZ7 3565 aa11.71□□□□□ -0.54
SSB-203ENST00000413002 FAAHO00519 579 aa11.7□□□□□ -0.54
SSB-203ENST00000413002 IMPDH2P12268 514 aa11.7□□□□□ -0.54
SSB-203ENST00000413002 UQCRBP14927 111 aa11.7□□□□□ -0.54
SSB-203ENST00000413002 CXCR1P25024 350 aa11.7□□□□□ -0.54
SSB-203ENST00000413002 EDNRAP25101 427 aa11.7□□□□□ -0.54
SSB-203ENST00000413002 CCKARP32238 428 aa11.7□□□□□ -0.54
SSB-203ENST00000413002 CD79BP40259 229 aa11.7□□□□□ -0.54
SSB-203ENST00000413002 HTR3AP46098 478 aa11.7□□□□□ -0.54
SSB-203ENST00000413002 COPZ1P61923 177 aa11.7□□□□□ -0.54
SSB-203ENST00000413002 RASGEF1BQ0VAM2 473 aa11.7□□□□□ -0.54
SSB-203ENST00000413002 CYLC2Q14093 348 aaPredicted RBP11.7□□□□□ -0.54
SSB-203ENST00000413002 POU4F3Q15319 338 aa11.7□□□□□ -0.54
SSB-203ENST00000413002 TMEM201Q5SNT2 666 aa11.7□□□□□ -0.54
SSB-203ENST00000413002 GTF2IRD2BQ6EKJ0 949 aa11.7□□□□□ -0.54
SSB-203ENST00000413002 WBP2NLQ6ICG8 309 aa11.7□□□□□ -0.54
SSB-203ENST00000413002 C22orf34Q6ZV56 151 aa11.7□□□□□ -0.54
SSB-203ENST00000413002 MTDHQ86UE4 582 aaKnown RBP11.7□□□□□ -0.54
SSB-203ENST00000413002 GTF2IRD2Q86UP8 949 aa11.7□□□□□ -0.54
SSB-203ENST00000413002 KRT73Q86Y46 540 aa11.7□□□□□ -0.54
SSB-203ENST00000413002 C11orf65Q8NCR3 313 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms