RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 EXOC3L2Q2M3D2 409 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 RUNDC3AQ59EK9 446 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 ZNF311Q5JNZ3 666 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 RNF220Q5VTB9 566 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 TMPPEQ6ZT21 453 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 TUSC5Q8IXB3 177 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 DPP10Q8N608 796 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 ARL5BQ96KC2 179 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 CPPED1Q9BRF8 314 aaPredicted RBP16.8■□□□□ 0.28
TRIM56-202ENST00000412507 SLC39A3Q9BRY0 314 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 SPATA9Q9BWV2 254 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 POLDIP3Q9BY77 421 aaKnown RBP16.8■□□□□ 0.28
TRIM56-202ENST00000412507 OR11A1Q9GZK7 315 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 CCDC134Q9H6E4 229 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 RASSF1Q9NS23 344 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 OSGIN1Q9UJX0 560 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 CORO2BQ9UQ03 480 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 IFT52Q9Y366 437 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 TMED7Q9Y3B3 224 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 OTOGQ6ZRI0 2925 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 TMEM72A0PK05 275 aa16.79■□□□□ 0.28
TRIM56-202ENST00000412507 SMAD9O15198 467 aaKnown RBP16.79■□□□□ 0.28
TRIM56-202ENST00000412507 SLC1A3P43003 542 aa16.79■□□□□ 0.28
TRIM56-202ENST00000412507 POLR2HP52434 150 aaKnown RBP16.79■□□□□ 0.28
TRIM56-202ENST00000412507 CDK6Q00534 326 aa16.79■□□□□ 0.28
TRIM56-202ENST00000412507 TMEM201Q5SNT2 666 aa16.79■□□□□ 0.28
TRIM56-202ENST00000412507 NUFIP2Q7Z417 695 aaKnown RBP16.79■□□□□ 0.28
TRIM56-202ENST00000412507 CDH24Q86UP0 819 aa16.79■□□□□ 0.28
TRIM56-202ENST00000412507 SLC43A2Q8N370 569 aa16.79■□□□□ 0.28
TRIM56-202ENST00000412507 TSPEARQ8WU66 669 aa16.79■□□□□ 0.28
TRIM56-202ENST00000412507 NRGNQ92686 78 aa16.79■□□□□ 0.28
TRIM56-202ENST00000412507 DACH2Q96NX9 599 aa16.79■□□□□ 0.28
TRIM56-202ENST00000412507 KLHL13Q9P2N7 655 aa16.79■□□□□ 0.28
TRIM56-202ENST00000412507 NDRG3Q9UGV2 375 aa16.79■□□□□ 0.28
TRIM56-202ENST00000412507 FESP07332 822 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 PRG2P13727 222 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 CCKARP32238 428 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 UGT2B10P36537 528 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 MDH1P40925 334 aaKnown RBP16.78■□□□□ 0.28
TRIM56-202ENST00000412507 PCYT1AP49585 367 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 CSNK2A1P68400 391 aaPredicted RBP16.78■□□□□ 0.28
TRIM56-202ENST00000412507 RASGEF1BQ0VAM2 473 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 NFYCQ13952 458 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 SELPLGQ14242 412 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 ZSWIM7Q19AV6 140 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 REEP3Q6NUK4 255 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 ZNF550Q7Z398 422 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 SERPINA11Q86U17 422 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 CADM2Q8N3J6 435 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 ANKRD27Q96NW4 1050 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 WFIKKN1Q96NZ8 548 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 CGREF1Q99674 301 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 PSD2Q9BQI7 771 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 RSPO3Q9BXY4 272 aaPredicted RBP16.78■□□□□ 0.28
TRIM56-202ENST00000412507 KLHL4Q9C0H6 718 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 ADAM19Q9H013 955 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 CLEC4MQ9H2X3 399 aaPredicted RBP16.78■□□□□ 0.28
TRIM56-202ENST00000412507 ARMC7Q9H6L4 198 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 KLHL28Q9NXS3 571 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 ING1Q9UK53 422 aaPredicted RBP16.78■□□□□ 0.28
TRIM56-202ENST00000412507 HDGFL3Q9Y3E1 203 aa16.78■□□□□ 0.28
TRIM56-202ENST00000412507 AKAP9Q99996 3911 aa16.77■□□□□ 0.28
TRIM56-202ENST00000412507 C16orf97H3BN30 126 aa16.77■□□□□ 0.28
TRIM56-202ENST00000412507 FRS3O43559 492 aa16.77■□□□□ 0.28
TRIM56-202ENST00000412507 CYTIPO60759 359 aa16.77■□□□□ 0.28
TRIM56-202ENST00000412507 YES1P07947 543 aa16.77■□□□□ 0.28
TRIM56-202ENST00000412507 ETS2P15036 469 aa16.77■□□□□ 0.28
TRIM56-202ENST00000412507 FKBP2P26885 142 aaKnown RBP16.77■□□□□ 0.28
TRIM56-202ENST00000412507 CLK1P49759 484 aaKnown RBP16.77■□□□□ 0.28
TRIM56-202ENST00000412507 MTPNP58546 118 aa16.77■□□□□ 0.28
TRIM56-202ENST00000412507 COPZ1P61923 177 aa16.77■□□□□ 0.28
TRIM56-202ENST00000412507 SCARB2Q14108 478 aa16.77■□□□□ 0.28
TRIM56-202ENST00000412507 ADRM1Q16186 407 aa16.77■□□□□ 0.28
TRIM56-202ENST00000412507 ANKRD34AQ69YU3 496 aa16.77■□□□□ 0.28
TRIM56-202ENST00000412507 ZNF775Q96BV0 537 aaPredicted RBP16.77■□□□□ 0.28
TRIM56-202ENST00000412507 TMEM38AQ9H6F2 299 aa16.77■□□□□ 0.28
TRIM56-202ENST00000412507 GP6Q9HCN6 339 aa16.77■□□□□ 0.28
TRIM56-202ENST00000412507 KLHL9Q9P2J3 617 aa16.77■□□□□ 0.28
TRIM56-202ENST00000412507 ITGB1BP2Q9UKP3 347 aa16.77■□□□□ 0.28
TRIM56-202ENST00000412507 TESMINQ9Y4I5 508 aa16.77■□□□□ 0.28
TRIM56-202ENST00000412507 ZC3H12DA2A288 527 aaKnown RBP16.76■□□□□ 0.27
TRIM56-202ENST00000412507 FBP2O00757 339 aa16.76■□□□□ 0.27
TRIM56-202ENST00000412507 CASKO14936 926 aa16.76■□□□□ 0.27
TRIM56-202ENST00000412507 ZNF208O43345 1280 aa16.76■□□□□ 0.27
TRIM56-202ENST00000412507 PMS2P2O95744 297 aa16.76■□□□□ 0.27
TRIM56-202ENST00000412507 SLC6A2P23975 617 aa16.76■□□□□ 0.27
TRIM56-202ENST00000412507 OR2B6P58173 313 aa16.76■□□□□ 0.27
TRIM56-202ENST00000412507 HOXC5Q00444 222 aa16.76■□□□□ 0.27
TRIM56-202ENST00000412507 KLF10Q13118 480 aa16.76■□□□□ 0.27
TRIM56-202ENST00000412507 FBXW10Q5XX13 1052 aa16.76■□□□□ 0.27
TRIM56-202ENST00000412507 WBP2NLQ6ICG8 309 aa16.76■□□□□ 0.27
TRIM56-202ENST00000412507 BEND4Q6ZU67 534 aa16.76■□□□□ 0.27
TRIM56-202ENST00000412507 MTDHQ86UE4 582 aaKnown RBP16.76■□□□□ 0.27
TRIM56-202ENST00000412507 STK32CQ86UX6 486 aa16.76■□□□□ 0.27
TRIM56-202ENST00000412507 CDC20BQ86Y33 519 aa16.76■□□□□ 0.27
TRIM56-202ENST00000412507 DDIT4LQ96D03 193 aa16.76■□□□□ 0.27
TRIM56-202ENST00000412507 ZNF300Q96RE9 604 aaPredicted RBP16.76■□□□□ 0.27
TRIM56-202ENST00000412507 MED18Q9BUE0 208 aa16.76■□□□□ 0.27
TRIM56-202ENST00000412507 BCO1Q9HAY6 547 aa16.76■□□□□ 0.27
TRIM56-202ENST00000412507 SAR1AQ9NR31 198 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms