RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 CDK10Q15131 360 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 AP5B1Q2VPB7 878 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 ZNF404Q494X3 552 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 VPS26BQ4G0F5 336 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 C1QL3Q5VWW1 255 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 GLYATQ6IB77 296 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 SPINK14Q6IE38 97 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 SLC25A25Q6KCM7 469 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 ZNF544Q6NX49 715 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 METTL2BQ6P1Q9 378 aaKnown RBP4.85□□□□□ -1.63
LINC00342-201ENST00000412393 MED27Q6P2C8 311 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 GALNTL5Q7Z4T8 443 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 FJX1Q86VR8 437 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 P2RY8Q86VZ1 359 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 ZNF595Q8IYB9 648 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 LAS2Q8IYD9 372 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 UBQLNLQ8IYU4 475 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 EID3Q8N140 333 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 HORMAD2Q8N7B1 307 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 CCNYL1Q8N7R7 359 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 TMEM178AQ8NBL3 297 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 FAM98AQ8NCA5 519 aaKnown RBP4.85□□□□□ -1.63
LINC00342-201ENST00000412393 SRFBP1Q8NEF9 429 aaKnown RBP4.85□□□□□ -1.63
LINC00342-201ENST00000412393 VPS37AQ8NEZ2 397 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 B3GNT7Q8NFL0 401 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 OR7G3Q8NG95 312 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 UBTD2Q8WUN7 234 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 PIK3R3Q92569 461 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 SLC38A4Q969I6 547 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 UBE2E3Q969T4 207 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 TMBIM1Q969X1 311 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 SCMH1Q96GD3 660 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 C3orf30Q96M34 536 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 ZNF583Q96ND8 569 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 SIGLEC12Q96PQ1 595 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 GPHA2Q96T91 129 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 KCTD14Q9BQ13 255 aaPredicted RBP4.85□□□□□ -1.63
LINC00342-201ENST00000412393 TBCDQ9BTW9 1192 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 HES7Q9BYE0 225 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 DEFB126Q9BYW3 111 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 ROGDIQ9GZN7 287 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 KAT8Q9H7Z6 458 aaKnown RBP4.85□□□□□ -1.63
LINC00342-201ENST00000412393 ADAP2Q9NPF8 381 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 ANKRD10Q9NXR5 420 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 ASIC5Q9NY37 505 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 LRFN1Q9P244 771 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 SEC14L3Q9UDX4 400 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 FBXW2Q9UKT8 454 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 NDRG4Q9ULP0 352 aaKnown RBP4.85□□□□□ -1.63
LINC00342-201ENST00000412393 DAPP1Q9UN19 280 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 USP22Q9UPT9 525 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 AURKCQ9UQB9 309 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 TIMM22Q9Y584 194 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 PEX16Q9Y5Y5 336 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 EXPH5Q8NEV8 1989 aa4.85□□□□□ -1.63
LINC00342-201ENST00000412393 ARHGAP21Q5T5U3 1957 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 TRGV8A0A0C4DH27 118 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 ASPDHA6ND91 283 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 SYNDIG1LA6NDD5 238 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 A8MVJ9 347 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 RTCAO00442 366 aaKnown RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 CCL21O00585 134 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 ANKRD28O15084 1053 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 NME2P1O60361 137 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 ZG16O60844 167 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 CTNSO60931 367 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 SH3BGRLO75368 114 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 SLC25A12O75746 678 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 SLC22A3O75751 556 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 NEURL1O76050 574 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 ZFAND5O76080 213 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 INMTO95050 263 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 CLDN1O95832 211 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 AMY2AP04746 511 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 IFNA16P05015 189 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 SP1P08047 785 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 ABCB1P08183 1280 aaPredicted RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 UROSP10746 265 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 MTHFD2P13995 350 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 ITGA2P17301 1181 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 TNNI3P19429 210 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 AMY2BP19961 511 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 TCEA1P23193 301 aaKnown RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 EEF1B2P24534 225 aaKnown RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 ATP5A1P25705 553 aaKnown RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 PPP2R1BP30154 601 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 RRM2P31350 389 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 DCTP40126 519 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 SSR2P43308 183 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 CLK3P49761 638 aaKnown RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 LIM2P55344 173 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 P2RX3P56373 397 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 DEFA1P59665 94 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 DEFA3P59666 94 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 COPZ1P61923 177 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 RPS13P62277 151 aaKnown RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 ERVK-8P63133 956 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 ALDH6A1Q02252 535 aaKnown RBP4.84□□□□□ -1.63
LINC00342-201ENST00000412393 STX4Q12846 297 aa4.84□□□□□ -1.63
LINC00342-201ENST00000412393 LCP2Q13094 533 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms