RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 SMYD1Q8NB12 490 aa11.79□□□□□ -0.52
HDAC8-210ENST00000412342 ATP6V1C2Q8NEY4 427 aa11.79□□□□□ -0.52
HDAC8-210ENST00000412342 SLC25A43Q8WUT9 341 aaPredicted RBP11.79□□□□□ -0.52
HDAC8-210ENST00000412342 OSTF1Q92882 214 aa11.79□□□□□ -0.52
HDAC8-210ENST00000412342 C3orf49Q96BT1 292 aa11.79□□□□□ -0.52
HDAC8-210ENST00000412342 INTS12Q96CB8 462 aaKnown RBP11.79□□□□□ -0.52
HDAC8-210ENST00000412342 ARL5BQ96KC2 179 aa11.79□□□□□ -0.52
HDAC8-210ENST00000412342 LRRC37BQ96QE4 947 aa11.79□□□□□ -0.52
HDAC8-210ENST00000412342 ARHGDIGQ99819 225 aa11.79□□□□□ -0.52
HDAC8-210ENST00000412342 SFXN3Q9BWM7 321 aa11.79□□□□□ -0.52
HDAC8-210ENST00000412342 ARMC7Q9H6L4 198 aa11.79□□□□□ -0.52
HDAC8-210ENST00000412342 CACYBPQ9HB71 228 aaKnown RBP11.79□□□□□ -0.52
HDAC8-210ENST00000412342 ARL8BQ9NVJ2 186 aa11.79□□□□□ -0.52
HDAC8-210ENST00000412342 PAQR5Q9NXK6 330 aaPredicted RBP11.79□□□□□ -0.52
HDAC8-210ENST00000412342 TMED7-TICAM2A0A0A6YYA0 188 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 A0A1W2PNV4 684 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 TMEM72A0PK05 275 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 DVL2O14641 736 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 ZNF208O43345 1280 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 LGI1O95970 557 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 CRHP06850 196 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 KLK2P20151 261 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 BMP5P22003 454 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 OPRM1P35372 400 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 KIR2DL2P43627 348 aaPredicted RBP11.78□□□□□ -0.52
HDAC8-210ENST00000412342 AGFG1P52594 562 aaKnown RBP11.78□□□□□ -0.52
HDAC8-210ENST00000412342 CARD18P57730 90 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 NPTX1Q15818 432 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 SGCBQ16585 318 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 NRF1Q16656 503 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 FBXL19-AS1Q494R0 122 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 PDSS1Q5T2R2 415 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 INTS11Q5TA45 600 aaKnown RBP11.78□□□□□ -0.52
HDAC8-210ENST00000412342 GKAP1Q5VSY0 366 aaPredicted RBP11.78□□□□□ -0.52
HDAC8-210ENST00000412342 OR2A2Q6IF42 318 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 CHMP1BQ7LBR1 199 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 P4HA3Q7Z4N8 544 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 ATG4DQ86TL0 474 aaPredicted RBP11.78□□□□□ -0.52
HDAC8-210ENST00000412342 LSMEM1Q8N8F7 131 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 BHLHE22Q8NFJ8 381 aaPredicted RBP11.78□□□□□ -0.52
HDAC8-210ENST00000412342 OR2T12Q8NG77 320 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 OR4D11Q8NGI4 311 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 RNF128Q8TEB7 428 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 CPNE4Q96A23 557 aaPredicted RBP11.78□□□□□ -0.52
HDAC8-210ENST00000412342 PRR14Q9BWN1 585 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 OR11A1Q9GZK7 315 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 SERINC1Q9NRX5 453 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 AP3M1Q9Y2T2 418 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 TMED7Q9Y3B3 224 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 ADGRG4Q8IZF6 3080 aa11.78□□□□□ -0.52
HDAC8-210ENST00000412342 UNC79Q9P2D8 2635 aa11.77□□□□□ -0.52
HDAC8-210ENST00000412342 ZC3H12DA2A288 527 aaKnown RBP11.77□□□□□ -0.53
HDAC8-210ENST00000412342 SMAD9O15198 467 aaKnown RBP11.77□□□□□ -0.53
HDAC8-210ENST00000412342 SS18L1O75177 396 aaPredicted RBP11.77□□□□□ -0.53
HDAC8-210ENST00000412342 NPIPB7O75200 414 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 C8BP07358 591 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 FCGR2AP12318 317 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 SLC7A1P30825 629 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 CLK1P49759 484 aaKnown RBP11.77□□□□□ -0.53
HDAC8-210ENST00000412342 GSK3BP49841 420 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 MAP2K6P52564 334 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 RAC3P60763 192 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 PSME3P61289 254 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 LIPEQ05469 1076 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 MYBPHQ13203 477 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 KRT72Q14CN4 511 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 VWA1Q6PCB0 445 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 C6orf89Q6UWU4 347 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 TMPPEQ6ZT21 453 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 TSPYL5Q86VY4 417 aaPredicted RBP11.77□□□□□ -0.53
HDAC8-210ENST00000412342 MICU2Q8IYU8 434 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 CADM2Q8N3J6 435 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 CCDC197Q8NCU1 140 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 ROBO4Q8WZ75 1007 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 STARD4Q96DR4 205 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 OR5B2Q96R09 309 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 ENKD1Q9H0I2 346 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 EVA1AQ9H8M9 152 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 KCNJ16Q9NPI9 418 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 TMEM181Q9P2C4 612 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 TESQ9UGI8 421 aaKnown RBP11.77□□□□□ -0.53
HDAC8-210ENST00000412342 TAGLN3Q9UI15 199 aa11.77□□□□□ -0.53
HDAC8-210ENST00000412342 ING1Q9UK53 422 aaPredicted RBP11.77□□□□□ -0.53
HDAC8-210ENST00000412342 MCTS1Q9ULC4 181 aaKnown RBP11.77□□□□□ -0.53
HDAC8-210ENST00000412342 SPIN1Q9Y657 262 aaPredicted RBP11.77□□□□□ -0.53
HDAC8-210ENST00000412342 A0A1B0GWA3 101 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 ELOVL7A1L3X0 281 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 M0R3H8 397 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 SYNGR4O95473 234 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 PMS2P2O95744 297 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 CGAP01215 116 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 FESP07332 822 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 IMPDH2P12268 514 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 CCNA2P20248 432 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 ENPP1P22413 925 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 FKBP2P26885 142 aaKnown RBP11.76□□□□□ -0.53
HDAC8-210ENST00000412342 KDELR2P33947 212 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 DIO1P49895 249 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 ASCL1P50553 236 aa11.76□□□□□ -0.53
HDAC8-210ENST00000412342 RGS8P57771 180 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms