RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 ZNF705AQ6ZN79 300 aaPredicted RBP6.94□□□□□ -1.3
PTPN3-203ENST00000412145 OR14A16Q8NHC5 309 aa6.94□□□□□ -1.3
PTPN3-203ENST00000412145 TMEM18Q96B42 140 aa6.94□□□□□ -1.3
PTPN3-203ENST00000412145 SH3YL1Q96HL8 342 aaPredicted RBP6.94□□□□□ -1.3
PTPN3-203ENST00000412145 C20orf85Q9H1P6 137 aa6.94□□□□□ -1.3
PTPN3-203ENST00000412145 KLF15Q9UIH9 416 aa6.94□□□□□ -1.3
PTPN3-203ENST00000412145 CAMK2AQ9UQM7 478 aa6.94□□□□□ -1.3
PTPN3-203ENST00000412145 CORINQ9Y5Q5 1042 aa6.94□□□□□ -1.3
PTPN3-203ENST00000412145 KRBA1A5PL33 1030 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 NPIPB15A6NHN6 443 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 ANHXE9PGG2 379 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 RNASEK-C17orf49H0YIS7 233 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 ARNTLO00327 626 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 ST8SIA5O15466 376 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 EIF1BO60739 113 aaKnown RBP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 ADRA2CP18825 462 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 EPHA1P21709 976 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 HMGCLP35914 325 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 WASP42768 502 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 GPM6BQ13491 265 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 GUK1Q16774 197 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 SLC36A2Q495M3 483 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 PODNL1Q6PEZ8 512 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 ZNF322Q6U7Q0 402 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 Q6ZRG5 221 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 IRF2BP1Q8IU81 584 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 WDR20Q8TBZ3 569 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 MUCL1Q96DR8 90 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 ELOVL3Q9HB03 270 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 AK6Q9Y3D8 172 aaKnown RBP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 GOLT1BQ9Y3E0 138 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 RIPK3Q9Y572 518 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 PARP4Q9UKK3 1724 aaKnown RBP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 MYBPHLA2RUH7 354 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 A8MUA0 341 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 CHRM2P08172 466 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 TGM1P22735 817 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 CXADRP78310 365 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 ZNF791Q3KP31 576 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 GLYR1Q49A26 553 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 PLCXD3Q63HM9 321 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 PLBD1Q6P4A8 553 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 SSX7Q7RTT5 188 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 SIGLECL1Q8N7X8 197 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 NAT6Q93015 286 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 TECTBQ96PL2 329 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 ZPBPQ9BS86 351 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 DCAF13Q9NV06 445 aaKnown RBP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 NECAP2Q9NVZ3 263 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 EHFQ9NZC4 300 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 TMEM221A6NGB7 291 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 HAPLN1P10915 354 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 IDUAP35475 653 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 OPRD1P41143 372 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 RAB7AP51149 207 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 SLC35D3Q5M8T2 416 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 AGBL4Q5VU57 503 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 MDGA2Q7Z553 956 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 SPRED1Q7Z699 444 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 NRMQ8IXM6 262 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 DUSP19Q8WTR2 217 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 TFAP2BQ92481 460 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 YIPF5Q969M3 257 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 MARC2Q969Z3 335 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 PLEKHF2Q9H8W4 249 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 COL1A1P02452 1464 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 TNFRSF10AO00220 468 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 SNNO75324 88 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 SOD2P04179 222 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 HPNP05981 417 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 ACPPP15309 386 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 GDI1P31150 447 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 GRB2P62993 217 aaKnown RBP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 TNK1Q13470 666 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 TPBGQ13641 420 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 MEPCEQ7L2J0 689 aaKnown RBP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 BPHLQ86WA6 291 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 ZNF485Q8NCK3 441 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 OR1M1Q8NGA1 313 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 DIO2Q92813 273 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 NRIP3Q9NQ35 241 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 TMEM184BQ9Y519 407 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 CHEK1O14757 476 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 SIAH2O43255 324 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 SCO2O43819 266 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 OR2T7P0C7T2 308 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 FOLR1P15328 257 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 PAX6P26367 422 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 S100A11P31949 105 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 FXYD4P59646 89 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 CDK5Q00535 292 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 IL17AQ16552 155 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 SLC10A6Q3KNW5 377 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 COX19Q49B96 90 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 SFRP4Q6FHJ7 346 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 UQCC3Q6UW78 93 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 OR2L13Q8N349 312 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 OR52B6Q8NGF0 335 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms