RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 TMEM72A0PK05 275 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 ELOA3DA6NLF2 546 aaPredicted RBP13.72□□□□□ -0.21
LSM5-207ENST00000410044 ENTPD5O75356 428 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 DIRAS1O95057 198 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 IGF2P01344 180 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 H1F0P07305 194 aaKnown RBP13.72□□□□□ -0.21
LSM5-207ENST00000410044 EDN3P14138 238 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 IL11P20809 199 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 RBM34P42696 430 aaKnown RBP13.72□□□□□ -0.21
LSM5-207ENST00000410044 LIMS1P48059 325 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 LHX2P50458 406 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 ERFP50548 548 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 GK3PQ14409 553 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 TRAM2Q15035 370 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 ELOA3BQ3SY89 546 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 PRR30Q53SZ7 412 aaPredicted RBP13.72□□□□□ -0.21
LSM5-207ENST00000410044 OR2T5Q6IEZ7 315 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 C3orf33Q6P1S2 294 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 C5orf46Q6UWT4 87 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 NKAIN4Q8IVV8 208 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 ELOA3Q8NG57 546 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 OR2T29Q8NH02 315 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 CPT1CQ8TCG5 803 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 SARAFQ96BY9 339 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 TIMP4Q99727 224 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 FUZQ9BT04 418 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 TMEM43Q9BTV4 400 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 POTEKPQ9BYX7 375 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 SLC19A3Q9BZV2 496 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 TSPAN10Q9H1Z9 355 aaPredicted RBP13.72□□□□□ -0.21
LSM5-207ENST00000410044 SPRR3Q9UBC9 169 aa13.72□□□□□ -0.21
LSM5-207ENST00000410044 SPIN1Q9Y657 262 aaPredicted RBP13.72□□□□□ -0.21
LSM5-207ENST00000410044 ATRXP46100 2492 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 SHANK1Q9Y566 2161 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 A0A1B0GTH9 108 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 HTR3EA5X5Y0 456 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 A8MVM7 634 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 H3BNX3 289 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 ADAMDEC1O15204 470 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 FZD7O75084 574 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 CST1P01037 141 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 ZNF708P17019 499 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 FUT4P22083 530 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 STARP49675 285 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 CLDN15P56746 228 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 CLDN18P56856 261 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 ELF3P78545 371 aaPredicted RBP13.71□□□□□ -0.21
LSM5-207ENST00000410044 EGR4Q05215 589 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 SOWAHCQ53LP3 525 aaPredicted RBP13.71□□□□□ -0.21
LSM5-207ENST00000410044 WDR88Q6ZMY6 472 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 FGD2Q7Z6J4 655 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 RNF113BQ8IZP6 322 aaKnown RBP13.71□□□□□ -0.21
LSM5-207ENST00000410044 LILRA2Q8N149 483 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 OR6S1Q8NH40 331 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 WDYHV1Q96HA8 205 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 EXO5Q9H790 373 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 S100A14Q9HCY8 104 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 RHCGQ9UBD6 479 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 DNAJB9Q9UBS3 223 aa13.71□□□□□ -0.21
LSM5-207ENST00000410044 IGKV1D-42A0A075B6H8 117 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 GJE1A6NN92 205 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 BCKDKO14874 412 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 GADD45GO95257 159 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 MT-ND1P03886 318 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 FCGR1AP12314 374 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 TCEA1P23193 301 aaKnown RBP13.7□□□□□ -0.22
LSM5-207ENST00000410044 RRM2P31350 389 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 SUCLG1P53597 346 aaKnown RBP13.7□□□□□ -0.22
LSM5-207ENST00000410044 MLLT10P55197 1068 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 CTU2Q2VPK5 515 aaKnown RBP13.7□□□□□ -0.22
LSM5-207ENST00000410044 SYT14P1Q58G82 188 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 TTC33Q6PID6 262 aaPredicted RBP13.7□□□□□ -0.22
LSM5-207ENST00000410044 ESPNLQ6ZVH7 1005 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 GGNQ86UU5 652 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 OR4C15Q8NGM1 316 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 PYDC1Q8WXC3 89 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 ACOT11Q8WXI4 607 aaPredicted RBP13.7□□□□□ -0.22
LSM5-207ENST00000410044 DDIT4LQ96D03 193 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 ADGRG7Q96K78 797 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 PRDM14Q9GZV8 571 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 TRAPPC4Q9Y296 219 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 ZNF835Q9Y2P0 537 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 HDGFL3Q9Y3E1 203 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 TESMINQ9Y4I5 508 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 ZGRF1Q86YA3 2104 aa13.7□□□□□ -0.22
LSM5-207ENST00000410044 A0A087WUU8 490 aa13.69□□□□□ -0.22
LSM5-207ENST00000410044 A0A0J9YW62 118 aa13.69□□□□□ -0.22
LSM5-207ENST00000410044 B8ZZF3 427 aa13.69□□□□□ -0.22
LSM5-207ENST00000410044 H3BML4 177 aa13.69□□□□□ -0.22
LSM5-207ENST00000410044 CLOCKO15516 846 aa13.69□□□□□ -0.22
LSM5-207ENST00000410044 DEAF1O75398 565 aaPredicted RBP13.69□□□□□ -0.22
LSM5-207ENST00000410044 TIPRLO75663 272 aa13.69□□□□□ -0.22
LSM5-207ENST00000410044 POU3F2P20265 443 aaPredicted RBP13.69□□□□□ -0.22
LSM5-207ENST00000410044 FASP25445 335 aa13.69□□□□□ -0.22
LSM5-207ENST00000410044 SHC1P29353 583 aa13.69□□□□□ -0.22
LSM5-207ENST00000410044 ATP6AP1Q15904 470 aa13.69□□□□□ -0.22
LSM5-207ENST00000410044 TMEM176BQ3YBM2 270 aaPredicted RBP13.69□□□□□ -0.22
LSM5-207ENST00000410044 DCST1Q5T197 706 aa13.69□□□□□ -0.22
LSM5-207ENST00000410044 POMZP3Q6PJE2 187 aa13.69□□□□□ -0.22
LSM5-207ENST00000410044 Q6ZPB1 254 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms