RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 ZSCAN4Q8NAM6 433 aaPredicted RBP4.21□□□□□ -1.74
LSM5-206ENST00000409987 PRSS33Q8NF86 280 aa4.21□□□□□ -1.74
LSM5-206ENST00000409987 OR5L2Q8NGL0 311 aa4.21□□□□□ -1.74
LSM5-206ENST00000409987 OR1K1Q8NGR3 316 aa4.21□□□□□ -1.74
LSM5-206ENST00000409987 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.21□□□□□ -1.74
LSM5-206ENST00000409987 ARNTL2Q8WYA1 636 aa4.21□□□□□ -1.74
LSM5-206ENST00000409987 NR4A3Q92570 626 aa4.21□□□□□ -1.74
LSM5-206ENST00000409987 GTF3AQ92664 365 aaKnown RBP4.21□□□□□ -1.74
LSM5-206ENST00000409987 LGMNQ99538 433 aa4.21□□□□□ -1.74
LSM5-206ENST00000409987 C19orf43Q9BQ61 176 aa4.21□□□□□ -1.74
LSM5-206ENST00000409987 SYT11Q9BT88 431 aa4.21□□□□□ -1.74
LSM5-206ENST00000409987 FBXO44Q9H4M3 255 aa4.21□□□□□ -1.74
LSM5-206ENST00000409987 ANKRD19PQ9H560 264 aa4.21□□□□□ -1.74
LSM5-206ENST00000409987 ELOVL6Q9H5J4 265 aa4.21□□□□□ -1.74
LSM5-206ENST00000409987 C8orf33Q9H7E9 229 aaPredicted RBP4.21□□□□□ -1.74
LSM5-206ENST00000409987 EIF3KQ9UBQ5 218 aaKnown RBP4.21□□□□□ -1.74
LSM5-206ENST00000409987 RHBDD3Q9Y3P4 386 aa4.21□□□□□ -1.74
LSM5-206ENST00000409987 ATP10AO60312 1499 aa4.21□□□□□ -1.74
LSM5-206ENST00000409987 FRMPD1Q5SYB0 1578 aa4.21□□□□□ -1.74
LSM5-206ENST00000409987 DENND4BO75064 1496 aaPredicted RBP4.2□□□□□ -1.74
LSM5-206ENST00000409987 MAGI2Q86UL8 1455 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 EP400Q96L91 3159 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 IGHV4-30-2A0A087WSY4 118 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 A0A1W2PPV4 95 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 TUBAL3A6NHL2 446 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 ZNF724A8MTY0 619 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 NEDD8-MDP1E9PL57 170 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 WWP2O00308 870 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 DLGAP1O14490 977 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 TRAFD1O14545 582 aaPredicted RBP4.2□□□□□ -1.74
LSM5-206ENST00000409987 IDH3BO43837 385 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 MBP02144 154 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 APOA1P02647 267 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 GAPDHP04406 335 aaKnown RBP4.2□□□□□ -1.74
LSM5-206ENST00000409987 UGT1A4P22310 534 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 MT3P25713 68 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 CDH5P33151 784 aaPredicted RBP4.2□□□□□ -1.74
LSM5-206ENST00000409987 SAA4P35542 130 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 STK19P49842 368 aaPredicted RBP4.2□□□□□ -1.74
LSM5-206ENST00000409987 PEX3P56589 373 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 RPS27AP62979 156 aaKnown RBP4.2□□□□□ -1.74
LSM5-206ENST00000409987 XIAPP98170 497 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 TRDNQ13061 729 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 ILKQ13418 452 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 LY6DQ14210 128 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 STK38Q15208 465 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 SLC5A12Q1EHB4 618 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 SLC25A52Q3SY17 297 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 TP53I3Q53FA7 332 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 UNC50Q53HI1 259 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 TEX44Q53QW1 395 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 HSP90AA4PQ58FG1 418 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 MLIPQ5VWP3 458 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 PDPK2PQ6A1A2 396 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 BHLHA9Q7RTU4 235 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 APTXQ7Z2E3 356 aaKnown RBP4.2□□□□□ -1.74
LSM5-206ENST00000409987 MFSD6LQ8IWD5 586 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 SLC35F2Q8IXU6 374 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 SYCE1Q8N0S2 351 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 FBXL16Q8N461 479 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 Q8NBF4 154 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 ACMSDQ8TDX5 336 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 PAQR8Q8TEZ7 354 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 AENQ8WTP8 325 aaKnown RBP4.2□□□□□ -1.74
LSM5-206ENST00000409987 SSC4DQ8WTU2 575 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 PIBF1Q8WXW3 757 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.2□□□□□ -1.74
LSM5-206ENST00000409987 RAB1CQ92928 201 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 CIDECQ96AQ7 238 aaPredicted RBP4.2□□□□□ -1.74
LSM5-206ENST00000409987 NUS1Q96E22 293 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 TIMD4Q96H15 378 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 ZBED3Q96IU2 234 aaPredicted RBP4.2□□□□□ -1.74
LSM5-206ENST00000409987 TNFRSF13CQ96RJ3 184 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 SLITRK2Q9H156 845 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 IKZF5Q9H5V7 419 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 LYRM4Q9HD34 91 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 MTCH1Q9NZJ7 389 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 NUDT4Q9NZJ9 180 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 RCOR3Q9P2K3 495 aaPredicted RBP4.2□□□□□ -1.74
LSM5-206ENST00000409987 GMPPBQ9Y5P6 360 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 SALL1Q9NSC2 1324 aa4.2□□□□□ -1.74
LSM5-206ENST00000409987 MYH15Q9Y2K3 1946 aa4.19□□□□□ -1.74
LSM5-206ENST00000409987 TRBV5-4A0A0C4DH59 114 aa4.19□□□□□ -1.74
LSM5-206ENST00000409987 SOCS3O14543 225 aa4.19□□□□□ -1.74
LSM5-206ENST00000409987 RRP8O43159 456 aaKnown RBP4.19□□□□□ -1.74
LSM5-206ENST00000409987 DUSP11O75319 330 aaKnown RBP4.19□□□□□ -1.74
LSM5-206ENST00000409987 PDE5AO76074 875 aa4.19□□□□□ -1.74
LSM5-206ENST00000409987 YEATS4O95619 227 aa4.19□□□□□ -1.74
LSM5-206ENST00000409987 JCHAINP01591 159 aa4.19□□□□□ -1.74
LSM5-206ENST00000409987 CLTAP09496 248 aa4.19□□□□□ -1.74
LSM5-206ENST00000409987 ATP5A1P25705 553 aaKnown RBP4.19□□□□□ -1.74
LSM5-206ENST00000409987 HMGB2P26583 209 aaKnown RBP4.19□□□□□ -1.74
LSM5-206ENST00000409987 RPL9P32969 192 aaKnown RBP4.19□□□□□ -1.74
LSM5-206ENST00000409987 FKBP3Q00688 224 aaKnown RBP4.19□□□□□ -1.74
LSM5-206ENST00000409987 RIPPLY1Q0D2K3 151 aa4.19□□□□□ -1.74
LSM5-206ENST00000409987 RAB35Q15286 201 aa4.19□□□□□ -1.74
LSM5-206ENST00000409987 PPP1R3AQ16821 1122 aa4.19□□□□□ -1.74
LSM5-206ENST00000409987 MRGPRG-AS1Q2M3A8 158 aa4.19□□□□□ -1.74
LSM5-206ENST00000409987 C14orf177Q52M58 125 aa4.19□□□□□ -1.74
LSM5-206ENST00000409987 CCDC122Q5T0U0 273 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms