RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 LIX1LQ8IVB5 337 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 GCNT2Q8N0V5 402 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 SLC43A2Q8N370 569 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 CADM2Q8N3J6 435 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 CNEP1R1Q8N9A8 125 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 RELL2Q8NC24 303 aaPredicted RBP9.78□□□□□ -0.84
CHMP3-205ENST00000409810 ZNF524Q96C55 264 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 GMPPAQ96IJ6 420 aaPredicted RBP9.78□□□□□ -0.84
CHMP3-205ENST00000409810 CCT8L2Q96SF2 557 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 COQ10BQ9H8M1 238 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 RNF122Q9H9V4 155 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 SLC24A3Q9HC58 644 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 SELENONQ9NZV5 590 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 RPS6KB2Q9UBS0 482 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 TESQ9UGI8 421 aaKnown RBP9.78□□□□□ -0.84
CHMP3-205ENST00000409810 OSGIN1Q9UJX0 560 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 PACSIN3Q9UKS6 424 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 TMED7Q9Y3B3 224 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 EMC9Q9Y3B6 208 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 CACNA1DQ01668 2161 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 NBPF19A0A087WUL8 3843 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 A0A1W2PNR3 127 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 A0A1W2PNV4 684 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 M0QX08 132 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 SULT2B1O00204 365 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 SYT5O00445 386 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 DNPH1O43598 174 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 MFN2O95140 757 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 PMS2P2O95744 297 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 C8BP07358 591 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 ENPP1P22413 925 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 GRNP28799 593 aaKnown RBP9.77□□□□□ -0.85
CHMP3-205ENST00000409810 ACAA2P42765 397 aaKnown RBP9.77□□□□□ -0.85
CHMP3-205ENST00000409810 GZMMP51124 257 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 TFF3Q07654 80 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 VEZF1Q14119 521 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 FBXL19-AS1Q494R0 122 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 PLXDC2Q6UX71 529 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 TMPPEQ6ZT21 453 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 CCDC80Q76M96 950 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 FCRLAQ7L513 359 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 RANBP3LQ86VV4 465 aaPredicted RBP9.77□□□□□ -0.85
CHMP3-205ENST00000409810 CALHM3Q86XJ0 350 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 ADGRG3Q86Y34 549 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 ANKS4BQ8N8V4 417 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 SMYD1Q8NB12 490 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 OR2T12Q8NG77 320 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 SPOCK3Q9BQ16 436 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 ZNF559Q9BR84 538 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 TACO1Q9BSH4 297 aaKnown RBP9.77□□□□□ -0.85
CHMP3-205ENST00000409810 SRXN1Q9BYN0 137 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 TRIM2Q9C040 744 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 ADAM19Q9H013 955 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 PIF1Q9H611 641 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 C12orf10Q9HB07 376 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 FAM53CQ9NYF3 392 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 CHST2Q9Y4C5 530 aa9.77□□□□□ -0.85
CHMP3-205ENST00000409810 UTP20O75691 2785 aaKnown RBP9.77□□□□□ -0.85
CHMP3-205ENST00000409810 TMEM72A0PK05 275 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 ELOVL7A1L3X0 281 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 MSTNO14793 375 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 FRS3O43559 492 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 SHOX2O60902 331 aaPredicted RBP9.76□□□□□ -0.85
CHMP3-205ENST00000409810 SS18L1O75177 396 aaPredicted RBP9.76□□□□□ -0.85
CHMP3-205ENST00000409810 TNFSF13O75888 250 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 AQP8O94778 261 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 OPN1SWP03999 348 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 CCNA2P20248 432 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 COL8A1P27658 744 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 UQCRC1P31930 480 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 DIO1P49895 249 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 AGFG1P52594 562 aaKnown RBP9.76□□□□□ -0.85
CHMP3-205ENST00000409810 SIRPAP78324 504 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 DMTNQ08495 405 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 FOXF2Q12947 444 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 TMEM201Q5SNT2 666 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 MEX3BQ6ZN04 569 aaKnown RBP9.76□□□□□ -0.85
CHMP3-205ENST00000409810 FAM214BQ7L5A3 538 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 KIF18BQ86Y91 864 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 LSMEM1Q8N8F7 131 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 CCDC197Q8NCU1 140 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 OR52E4Q8NGH9 312 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 OR6K3Q8NGY3 331 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 RNF128Q8TEB7 428 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 DNAJA4Q8WW22 397 aaPredicted RBP9.76□□□□□ -0.85
CHMP3-205ENST00000409810 RNASE6Q93091 150 aaKnown RBP9.76□□□□□ -0.85
CHMP3-205ENST00000409810 C3orf49Q96BT1 292 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 ZNF583Q96ND8 569 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 GPATCH1Q9BRR8 931 aaKnown RBP9.76□□□□□ -0.85
CHMP3-205ENST00000409810 ENKD1Q9H0I2 346 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 TMEM27Q9HBJ8 222 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 GP6Q9HCN6 339 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 FANCFQ9NPI8 374 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 NDE1Q9NXR1 346 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 KLHL9Q9P2J3 617 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 TAGLN3Q9UI15 199 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 BAG5Q9UL15 447 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 PROCRQ9UNN8 238 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 TRAPPC4Q9Y296 219 aa9.76□□□□□ -0.85
CHMP3-205ENST00000409810 SLC9A8Q9Y2E8 581 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms