RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 DNASE1L3Q13609 305 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 ARHGAP40Q5TG30 622 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 STEAP3Q658P3 488 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 VASNQ6EMK4 673 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 TMPRSS11AQ6ZMR5 421 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 ARIH2OSQ8N7S6 290 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 DRAXINQ8NBI3 349 aaPredicted RBP18.44■□□□□ 0.54
USP39-204ENST00000409766 OR5M3Q8NGP4 307 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 SLC19A3Q9BZV2 496 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 EXOSC3Q9NQT5 275 aaKnown RBP18.44■□□□□ 0.54
USP39-204ENST00000409766 FBXL4Q9UKA2 621 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 PCDHGB6Q9Y5F9 930 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 C2orf92A0A1B0GVN3 265 aa18.43■□□□□ 0.54
USP39-204ENST00000409766 LRRN3E7EW58 273 aa18.43■□□□□ 0.54
USP39-204ENST00000409766 REM1O75628 298 aa18.43■□□□□ 0.54
USP39-204ENST00000409766 PPM1BO75688 479 aa18.43■□□□□ 0.54
USP39-204ENST00000409766 CLEC2LP0C7M8 214 aa18.43■□□□□ 0.54
USP39-204ENST00000409766 SDC2P34741 201 aa18.43■□□□□ 0.54
USP39-204ENST00000409766 RPS7P62081 194 aaKnown RBP18.43■□□□□ 0.54
USP39-204ENST00000409766 BDH1Q02338 343 aa18.43■□□□□ 0.54
USP39-204ENST00000409766 RUNX1T1Q06455 604 aa18.43■□□□□ 0.54
USP39-204ENST00000409766 LYSMD4Q5XG99 296 aa18.43■□□□□ 0.54
USP39-204ENST00000409766 WBP2NLQ6ICG8 309 aa18.43■□□□□ 0.54
USP39-204ENST00000409766 CBLN3Q6UW01 205 aa18.43■□□□□ 0.54
USP39-204ENST00000409766 ZNF554Q86TJ5 538 aa18.43■□□□□ 0.54
USP39-204ENST00000409766 KLBQ86Z14 1044 aa18.43■□□□□ 0.54
USP39-204ENST00000409766 FAM83FQ8NEG4 500 aaPredicted RBP18.43■□□□□ 0.54
USP39-204ENST00000409766 PHOSPHO1Q8TCT1 267 aa18.43■□□□□ 0.54
USP39-204ENST00000409766 ERMAPQ96PL5 475 aaPredicted RBP18.43■□□□□ 0.54
USP39-204ENST00000409766 SLC30A2Q9BRI3 323 aa18.43■□□□□ 0.54
USP39-204ENST00000409766 ALG8Q9BVK2 526 aa18.43■□□□□ 0.54
USP39-204ENST00000409766 LRRN3Q9H3W5 708 aa18.43■□□□□ 0.54
USP39-204ENST00000409766 HAO2Q9NYQ3 351 aa18.43■□□□□ 0.54
USP39-204ENST00000409766 MRTO4Q9UKD2 239 aaKnown RBP18.43■□□□□ 0.54
USP39-204ENST00000409766 GSTK1Q9Y2Q3 226 aa18.43■□□□□ 0.54
USP39-204ENST00000409766 PI4KAP42356 2102 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 IGKV1D-42A0A075B6H8 117 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 IFNGP01579 166 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 GALEQ14376 348 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 EBPQ15125 230 aaKnown RBP18.42■□□□□ 0.54
USP39-204ENST00000409766 TBC1D25Q3MII6 688 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 MAMSTRQ6ZN01 415 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 KANSL1Q7Z3B3 1105 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 TMPRSS9Q7Z410 1059 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 SLC22A16Q86VW1 577 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 C9orf40Q8IXQ3 194 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 SYT14Q8NB59 555 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 DAZLQ92904 295 aaKnown RBP18.42■□□□□ 0.54
USP39-204ENST00000409766 CEP19Q96LK0 163 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 GAL3ST4Q96RP7 486 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 CCNL2Q96S94 520 aaPredicted RBP18.42■□□□□ 0.54
USP39-204ENST00000409766 DCLRE1CQ96SD1 692 aaKnown RBP18.42■□□□□ 0.54
USP39-204ENST00000409766 ADOQ96SZ5 270 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 TBX5Q99593 518 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 COQ7Q99807 217 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 IER2Q9BTL4 223 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 VN1R1Q9GZP7 353 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 ADGRL4Q9HBW9 690 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 POLE4Q9NR33 117 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 INPP5EQ9NRR6 644 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 DAPL1A0PJW8 107 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 MCIDASD6RGH6 385 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 ZNF264O43296 627 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 SBK2P0C263 348 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 GTF2E2P29084 291 aaKnown RBP18.42■□□□□ 0.54
USP39-204ENST00000409766 HOXA6P31267 233 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 DHPSP49366 369 aaPredicted RBP18.42■□□□□ 0.54
USP39-204ENST00000409766 SLC16A1P53985 500 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 DCAF7P61962 342 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 ZNF574Q6ZN55 896 aaPredicted RBP18.42■□□□□ 0.54
USP39-204ENST00000409766 PRSS58Q8IYP2 241 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 ATP6V1C2Q8NEY4 427 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 OR14A16Q8NHC5 309 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 KATNB1Q9BVA0 655 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 TMED9Q9BVK6 235 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 BABAM2Q9NXR7 383 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 PLEKHB1Q9UF11 243 aaPredicted RBP18.42■□□□□ 0.54
USP39-204ENST00000409766 MKL2Q9ULH7 1088 aa18.42■□□□□ 0.54
USP39-204ENST00000409766 COL6A3P12111 3177 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 MPDZO75970 2070 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 CCDC163A0A0D9SF12 145 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 LOC110117498-PIK3R3F6TDL0 507 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 TOX3O15405 576 aaPredicted RBP18.41■□□□□ 0.54
USP39-204ENST00000409766 RGS5O15539 181 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 OR7A10O76100 309 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 SNX4O95219 450 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 HLA-DPB1P04440 258 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 GAAP10253 952 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 HIST1H1CP16403 213 aaKnown RBP18.41■□□□□ 0.54
USP39-204ENST00000409766 EPHA8P29322 1005 aaPredicted RBP18.41■□□□□ 0.54
USP39-204ENST00000409766 PSPHP78330 225 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 HNRNPA0Q13151 305 aaKnown RBP18.41■□□□□ 0.54
USP39-204ENST00000409766 DESI1Q6ICB0 168 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 TMEM71Q6P5X7 295 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 ATG4DQ86TL0 474 aaPredicted RBP18.41■□□□□ 0.54
USP39-204ENST00000409766 PRR22Q8IZ63 422 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 OR10H4Q8NGA5 316 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 OR52E2Q8NGJ4 325 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 ASB15Q8WXK1 588 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 LRFN5Q96NI6 719 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms