RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 TBL1XR1Q9BZK7 514 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 AKIRIN1Q9H9L7 192 aaPredicted RBP12.88□□□□□ -0.35
LIMS2-206ENST00000409754 C12orf10Q9HB07 376 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 MSRB2Q9Y3D2 182 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 AHCTF1Q8WYP5 2266 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 ANKRD11Q6UB99 2663 aaPredicted RBP12.87□□□□□ -0.35
LIMS2-206ENST00000409754 LOC102723996A0A087X1L8 192 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 C9J4A7 227 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 BHLHE40O14503 412 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 NDUFB5O43674 189 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 FADS1O60427 444 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 GABARAPO95166 117 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 PTHP01270 115 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 ADRA2AP08913 450 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 PEX19P40855 299 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 CCR4P51679 360 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 SLC26A5P58743 744 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 ZNF117Q03924 483 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 TIGD6Q17RP2 521 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 KLHL22Q53GT1 634 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 C3orf38Q5JPI3 329 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 AADACL4Q5VUY2 407 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 ZNF517Q6ZMY9 492 aaPredicted RBP12.87□□□□□ -0.35
LIMS2-206ENST00000409754 ATG4DQ86TL0 474 aaPredicted RBP12.87□□□□□ -0.35
LIMS2-206ENST00000409754 TMCO5AQ8N6Q1 288 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 ZFAND2BQ8WV99 257 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 MR1Q95460 341 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 ULBP3Q9BZM4 244 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 ASCL3Q9NQ33 180 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 IL20RAQ9UHF4 553 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.87□□□□□ -0.35
LIMS2-206ENST00000409754 BAIAP2Q9UQB8 552 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 GPR52Q9Y2T5 361 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 NPFFR2Q9Y5X5 522 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 USP24Q9UPU5 2620 aa12.87□□□□□ -0.35
LIMS2-206ENST00000409754 MAP1BP46821 2468 aaKnown RBP12.87□□□□□ -0.35
LIMS2-206ENST00000409754 TPRP12270 2363 aaKnown RBP12.86□□□□□ -0.35
LIMS2-206ENST00000409754 LOC400499M0QZD8 3231 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 DSPP15924 2871 aaKnown RBP12.86□□□□□ -0.35
LIMS2-206ENST00000409754 TRBV11-1A0A0K0K1C0 115 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 ELOA3DA6NLF2 546 aaPredicted RBP12.86□□□□□ -0.35
LIMS2-206ENST00000409754 TMX2-CTNND1H3BSU7 103 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 M0R082 166 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 CH25HO95992 272 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 NAGAP17050 411 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 EVI2BP34910 448 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 SLC9A3P48764 834 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 RAB15P59190 212 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 ELOA3BQ3SY89 546 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 RTL4Q6ZR62 310 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 RAB11FIP2Q7L804 512 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 OAFQ86UD1 273 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 MARCH3Q86UD3 253 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 P2RY8Q86VZ1 359 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 ELOA3Q8NG57 546 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 RFKQ969G6 155 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 TMEM43Q9BTV4 400 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 RTN4RQ9BZR6 473 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 STRADBQ9C0K7 418 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 FN3KQ9H479 309 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 DIMT1Q9UNQ2 313 aaKnown RBP12.86□□□□□ -0.35
LIMS2-206ENST00000409754 LOXL2Q9Y4K0 774 aa12.86□□□□□ -0.35
LIMS2-206ENST00000409754 HEATR5AQ86XA9 2040 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 TRAV27A0A087WT01 109 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 CCDC187A0A096LP49 1063 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 A0A1W2PPW3 197 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 TRABD2BA6NFA1 517 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 GNB5O14775 395 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 HCRTR2O43614 444 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 ZFAND5O76080 213 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 RAB36O95755 333 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 TGFBR2P37173 567 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 SLC1A3P43003 542 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 GAS1P54826 345 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 MLLT10P55197 1068 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 RAB40BQ12829 278 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 NFATC3Q12968 1075 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 FHL1Q13642 323 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 RTP5Q14D33 572 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 CTF1Q16619 201 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 NXNL2Q5VZ03 156 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 FAM199XQ6PEV8 388 aaPredicted RBP12.85□□□□□ -0.35
LIMS2-206ENST00000409754 THSD4Q6ZMP0 1018 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 MISPQ8IVT2 679 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 OR52I1Q8NGK6 324 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 OR51A7Q8NH64 312 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 C8orf44Q96CB5 159 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 LGALS12Q96DT0 336 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 IFT27Q9BW83 186 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 ADAM19Q9H013 955 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 RACGAP1Q9H0H5 632 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 ENKD1Q9H0I2 346 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 ZBTB20Q9HC78 741 aaPredicted RBP12.85□□□□□ -0.35
LIMS2-206ENST00000409754 MCCC2Q9HCC0 563 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 FGF20Q9NP95 211 aaPredicted RBP12.85□□□□□ -0.35
LIMS2-206ENST00000409754 TAS2R16Q9NYV7 291 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 ERGIC3Q9Y282 383 aa12.85□□□□□ -0.35
LIMS2-206ENST00000409754 IGKV1D-42A0A075B6H8 117 aa12.84□□□□□ -0.35
LIMS2-206ENST00000409754 TMEM200CA6NKL6 621 aa12.84□□□□□ -0.35
LIMS2-206ENST00000409754 OR7A10O76100 309 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms