RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 H3BNX3 289 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 NKX2-8O15522 239 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 DNAJB5O75953 348 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 NID1P14543 1247 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 MMP11P24347 488 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 SH3BGRP55822 239 aaPredicted RBP10.48□□□□□ -0.73
SNX13-202ENST00000409604 RIN1Q13671 783 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 ARTNQ5T4W7 220 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 OVCH1Q7RTY7 1134 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 LINC00346Q8IVM7 164 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 LSM14AQ8ND56 463 aaKnown RBP10.48□□□□□ -0.73
SNX13-202ENST00000409604 UFD1Q92890 307 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 WWTR1Q9GZV5 400 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 DUSP22Q9NRW4 184 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 MED29Q9NX70 200 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 SIDT1Q9NXL6 827 aaKnown RBP10.48□□□□□ -0.73
SNX13-202ENST00000409604 IL17BQ9UHF5 180 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 SLC2A10O95528 541 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 ADAP00813 363 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 HOXB6P17509 224 aaKnown RBP10.47□□□□□ -0.73
SNX13-202ENST00000409604 HOXD12P35452 270 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 CLDN17P56750 224 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 WIPI1Q5MNZ9 446 aaPredicted RBP10.47□□□□□ -0.73
SNX13-202ENST00000409604 OR2G6Q5TZ20 316 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 B3GNT6Q6ZMB0 384 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 TIGARQ9NQ88 270 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 RBM7Q9Y580 266 aaKnown RBP10.47□□□□□ -0.73
SNX13-202ENST00000409604 NOX1Q9Y5S8 564 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 ZNF407Q9C0G0 2248 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 PLXNA4Q9HCM2 1894 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 ANXA2P2A6NMY6 339 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 AHCYL1O43865 530 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 MAP3K8P41279 467 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 MAGEA2P43356 314 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 PPICP45877 212 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 CRMP1Q14194 572 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 RSBN1Q5VWQ0 802 aaPredicted RBP10.47□□□□□ -0.73
SNX13-202ENST00000409604 XKR5Q6UX68 686 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 SLC38A9Q8NBW4 561 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 NT5CQ8TCD5 201 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 KCNE4Q8WWG9 221 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 SLC39A7Q92504 469 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 RACGAP1Q9H0H5 632 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 MAGIXQ9H6Y5 334 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 ASB6Q9NWX5 421 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 VNN3Q9NY84 501 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 ABCD2Q9UBJ2 740 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 ING1Q9UK53 422 aaPredicted RBP10.47□□□□□ -0.73
SNX13-202ENST00000409604 BOKQ9UMX3 212 aaPredicted RBP10.47□□□□□ -0.73
SNX13-202ENST00000409604 SLC1A7O00341 560 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 H2BFMP0C1H6 154 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 ELAVL4P26378 380 aaKnown RBP10.47□□□□□ -0.73
SNX13-202ENST00000409604 ETV5P41161 510 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 HCCSP53701 268 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 CXCR4P61073 352 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 PRSS53Q2L4Q9 553 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 RBM48Q5RL73 367 aaKnown RBP10.47□□□□□ -0.73
SNX13-202ENST00000409604 LCN1P1Q5VSP4 162 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 RHBDD2Q6NTF9 364 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 SLCO4A1Q96BD0 722 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 MVB12AQ96EY5 273 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 DIRAS2Q96HU8 199 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 COMMD4Q9H0A8 199 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 RHBDL2Q9NX52 303 aa10.47□□□□□ -0.73
SNX13-202ENST00000409604 VSX1Q9NZR4 365 aaPredicted RBP10.47□□□□□ -0.73
SNX13-202ENST00000409604 TMEM184BQ9Y519 407 aaPredicted RBP10.47□□□□□ -0.73
SNX13-202ENST00000409604 CENPVL1A0A0U1RR11 272 aa10.46□□□□□ -0.73
SNX13-202ENST00000409604 TRIM3O75382 744 aaPredicted RBP10.46□□□□□ -0.73
SNX13-202ENST00000409604 FARS2O95363 451 aaKnown RBP10.46□□□□□ -0.73
SNX13-202ENST00000409604 OXSR1O95747 527 aaPredicted RBP10.46□□□□□ -0.73
SNX13-202ENST00000409604 SLC2A1P11166 492 aa10.46□□□□□ -0.73
SNX13-202ENST00000409604 EFNA3P52797 238 aa10.46□□□□□ -0.73
SNX13-202ENST00000409604 RRADP55042 308 aa10.46□□□□□ -0.73
SNX13-202ENST00000409604 MYBPC3Q14896 1274 aa10.46□□□□□ -0.73
SNX13-202ENST00000409604 KIRREL2Q6UWL6 708 aa10.46□□□□□ -0.73
SNX13-202ENST00000409604 LRRC56Q8IYG6 542 aaPredicted RBP10.46□□□□□ -0.73
SNX13-202ENST00000409604 D2HGDHQ8N465 521 aa10.46□□□□□ -0.73
SNX13-202ENST00000409604 PACRGLQ8N7B6 248 aa10.46□□□□□ -0.73
SNX13-202ENST00000409604 ZNF717Q9BY31 904 aaPredicted RBP10.46□□□□□ -0.73
SNX13-202ENST00000409604 CKLFQ9UBR5 152 aa10.46□□□□□ -0.73
SNX13-202ENST00000409604 LRRC42Q9Y546 428 aa10.46□□□□□ -0.73
SNX13-202ENST00000409604 ZNF182P17025 639 aaPredicted RBP10.46□□□□□ -0.74
SNX13-202ENST00000409604 DCAF7P61962 342 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 PDE7AQ13946 482 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 ANKDD1AQ495B1 522 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 DNM1P34Q6PK57 102 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 KMT5CQ86Y97 462 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 ZNF440Q8IYI8 595 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 ZNF101Q8IZC7 436 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 GCNT2Q8N0V5 402 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 ZNF501Q96CX3 271 aaPredicted RBP10.46□□□□□ -0.74
SNX13-202ENST00000409604 MROQ9BYG7 248 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 ASIC5Q9NY37 505 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 A0A1B0GVC2 190 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 PMS2P1A4D2B8 440 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 M0R082 166 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 SOCS6O14544 535 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 CDRT1O95170 752 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 CD2P06729 351 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 MAKP20794 623 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms