RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 GLRA3O75311 464 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 KRT33AO76009 404 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 AK1P00568 194 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 HMGN2P05204 90 aaKnown RBP6.81□□□□□ -1.32
LSM5-202ENST00000409292 IGFBP5P24593 272 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 SHC1P29353 583 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 APOBEC1P41238 236 aaKnown RBP6.81□□□□□ -1.32
LSM5-202ENST00000409292 MAP3K8P41279 467 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 NR4A2P43354 598 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 CCT5P48643 541 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 CLK1P49759 484 aaKnown RBP6.81□□□□□ -1.32
LSM5-202ENST00000409292 DIO1P49895 249 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 MERTKQ12866 999 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 CD226Q15762 336 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 TIGD2Q4W5G0 525 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 KLHL26Q53HC5 615 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 SLC25A53Q5H9E4 307 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 DCST2Q5T1A1 773 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 CCNJQ5T5M9 372 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 C11orf71Q6IPW1 123 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 CDC73Q6P1J9 531 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 TMPPEQ6ZT21 453 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 ATG4DQ86TL0 474 aaPredicted RBP6.81□□□□□ -1.32
LSM5-202ENST00000409292 TEX29Q8N6K0 151 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 C1orf162Q8NEQ5 155 aaPredicted RBP6.81□□□□□ -1.32
LSM5-202ENST00000409292 GPR119Q8TDV5 335 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 CDS1Q92903 461 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 CIDECQ96AQ7 238 aaPredicted RBP6.81□□□□□ -1.32
LSM5-202ENST00000409292 FBXO17Q96EF6 278 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 TSSK3Q96PN8 268 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 VRK1Q99986 396 aaPredicted RBP6.81□□□□□ -1.32
LSM5-202ENST00000409292 NAA11Q9BSU3 229 aaPredicted RBP6.81□□□□□ -1.32
LSM5-202ENST00000409292 COQ10BQ9H8M1 238 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 ZDHHC18Q9NUE0 388 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 EXD2Q9NVH0 621 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 ICAM5Q9UMF0 924 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 HDGFL3Q9Y3E1 203 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 PCNX3Q9H6A9 2034 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 FREM1Q5H8C1 2179 aa6.81□□□□□ -1.32
LSM5-202ENST00000409292 IGKV3D-15A0A087WSY6 115 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 A0A096LNT2 108 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 A0A0A6YYJ9 748 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 SLCO1B7G3V0H7 640 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 SMAD9O15198 467 aaKnown RBP6.8□□□□□ -1.32
LSM5-202ENST00000409292 EIF1BO60739 113 aaKnown RBP6.8□□□□□ -1.32
LSM5-202ENST00000409292 AGR2O95994 175 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 CSTAP01040 98 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 IGHV3-9P01782 118 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 CRYAAP02489 173 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 SBK3P0C264 359 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 UQCRBP14927 111 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 ZNF23P17027 643 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 PRPH2P23942 346 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 SLC1A3P43003 542 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 HTR3AP46098 478 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 CCT3P49368 545 aaKnown RBP6.8□□□□□ -1.32
LSM5-202ENST00000409292 CHN2P52757 468 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 UBE2NP61088 152 aaKnown RBP6.8□□□□□ -1.32
LSM5-202ENST00000409292 RPL38P63173 70 aaKnown RBP6.8□□□□□ -1.32
LSM5-202ENST00000409292 TRADDQ15628 312 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 CR1LQ2VPA4 569 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 CCDC153Q494R4 210 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 FAM153CQ494X1 144 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 SYT14P1Q58G82 188 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 ATAD3BQ5T9A4 648 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 ANKRD26P1Q6NSI1 321 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 SHQ1Q6PI26 577 aaKnown RBP6.8□□□□□ -1.32
LSM5-202ENST00000409292 CBLN3Q6UW01 205 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 CASP12Q6UXS9 341 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 ZYG11AQ6WRX3 759 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 EIF3MQ7L2H7 374 aaKnown RBP6.8□□□□□ -1.32
LSM5-202ENST00000409292 ARIH2OSQ8N7S6 290 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 MNS1Q8NEH6 495 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 OIT3Q8WWZ8 545 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 OR5P2Q8WZ92 322 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 HTRA1Q92743 480 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 FAM120BQ96EK7 910 aaKnown RBP6.8□□□□□ -1.32
LSM5-202ENST00000409292 OTUB1Q96FW1 271 aaPredicted RBP6.8□□□□□ -1.32
LSM5-202ENST00000409292 C16orf58Q96GQ5 468 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 ARL5BQ96KC2 179 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 EGLN2Q96KS0 407 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 MUS81Q96NY9 551 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 ZNF300Q96RE9 604 aaPredicted RBP6.8□□□□□ -1.32
LSM5-202ENST00000409292 NPAS1Q99742 590 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 LAT2Q9GZY6 243 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 GSTO2Q9H4Y5 243 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 EML4Q9HC35 981 aaKnown RBP6.8□□□□□ -1.32
LSM5-202ENST00000409292 OBP2BQ9NPH6 170 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 NPAP1Q9NZP6 1156 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 MALT1Q9UDY8 824 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 DCTN4Q9UJW0 460 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 PCDHGB4Q9UN71 923 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 SLC9A8Q9Y2E8 581 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 SLC25A15Q9Y619 301 aa6.8□□□□□ -1.32
LSM5-202ENST00000409292 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.8□□□□□ -1.32
LSM5-202ENST00000409292 FBN1P35555 2871 aaKnown RBP6.8□□□□□ -1.32
LSM5-202ENST00000409292 PLCE1Q9P212 2302 aa6.79□□□□□ -1.32
LSM5-202ENST00000409292 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.79□□□□□ -1.32
LSM5-202ENST00000409292 SERINC4A6NH21 518 aa6.79□□□□□ -1.32
LSM5-202ENST00000409292 B9A039 149 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms