RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 IL32P24001 234 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 MVDP53602 400 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 CRISP3P54108 245 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 OR2B6P58173 313 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 ADAM8P78325 824 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 MAPK11Q15759 364 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 ACKR1Q16570 336 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 SFRP5Q5T4F7 317 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 SLC2A7Q6PXP3 512 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 VRK2Q86Y07 508 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 ZNF440Q8IYI8 595 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 OR52P1PQ8NH57 321 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 SLC38A5Q8WUX1 472 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 GTF2H4Q92759 462 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 KISS1RQ969F8 398 aaPredicted RBP11.82□□□□□ -0.52
SDF4-203ENST00000403997 S100PBPQ96BU1 408 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 ARL5BQ96KC2 179 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 OR11A1Q9GZK7 315 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 RLIMQ9NVW2 624 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 OSGIN1Q9UJX0 560 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 ZNF232Q9UNY5 417 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 TMED7Q9Y3B3 224 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 HDGFL3Q9Y3E1 203 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 PCDHB14Q9Y5E9 798 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 ROS1P08922 2347 aa11.82□□□□□ -0.52
SDF4-203ENST00000403997 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.81□□□□□ -0.52
SDF4-203ENST00000403997 ZNF724A8MTY0 619 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 HMGB1P1B2RPK0 211 aaPredicted RBP11.81□□□□□ -0.52
SDF4-203ENST00000403997 CLIC1O00299 241 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 PMS2P2O95744 297 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 UQCRBP14927 111 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 FPR1P21462 350 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 LOXP28300 417 aaPredicted RBP11.81□□□□□ -0.52
SDF4-203ENST00000403997 TACR3P29371 465 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 OR3A2P47893 321 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 CLK1P49759 484 aaKnown RBP11.81□□□□□ -0.52
SDF4-203ENST00000403997 POLR2HP52434 150 aaKnown RBP11.81□□□□□ -0.52
SDF4-203ENST00000403997 NR1H2P55055 460 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 EPS8Q12929 822 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 FOXD4Q12950 439 aaPredicted RBP11.81□□□□□ -0.52
SDF4-203ENST00000403997 ITGADQ13349 1161 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 P2RY6Q15077 328 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 LIN52Q52LA3 116 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 GALNT5Q7Z7M9 940 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 ZNF100Q8IYN0 542 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 PIGTQ969N2 578 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 DDIT4LQ96D03 193 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 PLPPR2Q96GM1 343 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 TMEM19Q96HH6 336 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 EBF4Q9BQW3 602 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 CCDC28BQ9BUN5 200 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 PAIP1Q9H074 479 aaKnown RBP11.81□□□□□ -0.52
SDF4-203ENST00000403997 CACYBPQ9HB71 228 aaKnown RBP11.81□□□□□ -0.52
SDF4-203ENST00000403997 INTS9Q9NV88 658 aaKnown RBP11.81□□□□□ -0.52
SDF4-203ENST00000403997 THUMPD1Q9NXG2 353 aaKnown RBP11.81□□□□□ -0.52
SDF4-203ENST00000403997 PRSS50Q9UI38 385 aa11.81□□□□□ -0.52
SDF4-203ENST00000403997 A0A0G2JPF8 293 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 TMEM72A0PK05 275 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 HNRNPCL2B2RXH8 293 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 HNRNPCL3B7ZW38 293 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 FAAHO00519 579 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 HNRNPCL1O60812 293 aaKnown RBP11.8□□□□□ -0.52
SDF4-203ENST00000403997 SMPD2O60906 423 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 PLAUP00749 431 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 GKN3PP0CG01 181 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 HNRNPCL4P0DMR1 293 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 SLC1A3P43003 542 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 MRPL19P49406 292 aaKnown RBP11.8□□□□□ -0.52
SDF4-203ENST00000403997 AQP5P55064 265 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 NKX6-1P78426 367 aaPredicted RBP11.8□□□□□ -0.52
SDF4-203ENST00000403997 CAPRIN1Q14444 709 aaKnown RBP11.8□□□□□ -0.52
SDF4-203ENST00000403997 LARS2Q15031 903 aaKnown RBP11.8□□□□□ -0.52
SDF4-203ENST00000403997 PDK3Q15120 406 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 RGNQ15493 299 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 RPS26P11Q5JNZ5 115 aaPredicted RBP11.8□□□□□ -0.52
SDF4-203ENST00000403997 Q6ZT83 130 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 BHLHA15Q7RTS1 189 aaPredicted RBP11.8□□□□□ -0.52
SDF4-203ENST00000403997 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.8□□□□□ -0.52
SDF4-203ENST00000403997 CCDC103Q8IW40 242 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 PIGXQ8TBF5 258 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 HSD17B8Q92506 261 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 CCL19Q99731 98 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 RAD21L1Q9H4I0 556 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 ARMC7Q9H6L4 198 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 ARGLU1Q9NWB6 273 aaPredicted RBP11.8□□□□□ -0.52
SDF4-203ENST00000403997 CCDC167Q9P0B6 97 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 EMC3Q9P0I2 261 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 TMEM181Q9P2C4 612 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 TRAPPC4Q9Y296 219 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 ZNF443Q9Y2A4 671 aaPredicted RBP11.8□□□□□ -0.52
SDF4-203ENST00000403997 NOSIPQ9Y314 301 aaKnown RBP11.8□□□□□ -0.52
SDF4-203ENST00000403997 NAV3Q8IVL0 2385 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 DSPPQ9NZW4 1301 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 ARID1AO14497 2285 aa11.8□□□□□ -0.52
SDF4-203ENST00000403997 MAP1AP78559 2803 aaPredicted RBP11.79□□□□□ -0.52
SDF4-203ENST00000403997 A0A096LPI6 279 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 CDHR4A6H8M9 788 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 NR5A2O00482 541 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 ZNF208O43345 1280 aa11.79□□□□□ -0.52
SDF4-203ENST00000403997 DNPH1O43598 174 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms