RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 EMC3Q9P0I2 261 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 PRSS50Q9UI38 385 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 FN1P02751 2386 aaKnown RBP13.62□□□□□ -0.23
TPM1-207ENST00000403994 PLCE1Q9P212 2302 aa13.62□□□□□ -0.23
TPM1-207ENST00000403994 IGKV3D-15A0A087WSY6 115 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 RFXANKO14593 260 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 SLC22A3O75751 556 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 LYZL6O75951 148 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 PMS2P2O95744 297 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 IL6P05231 212 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 INHBBP09529 407 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 TFPIP10646 304 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 COX5AP20674 150 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 MVDP53602 400 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 ITGADQ13349 1161 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 MAPK11Q15759 364 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 MRPL2Q5T653 305 aaKnown RBP13.61□□□□□ -0.23
TPM1-207ENST00000403994 BHLHA15Q7RTS1 189 aaPredicted RBP13.61□□□□□ -0.23
TPM1-207ENST00000403994 YTHDF3Q7Z739 585 aaKnown RBP13.61□□□□□ -0.23
TPM1-207ENST00000403994 GALNT5Q7Z7M9 940 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 ATG4DQ86TL0 474 aaPredicted RBP13.61□□□□□ -0.23
TPM1-207ENST00000403994 ZNF775Q96BV0 537 aaPredicted RBP13.61□□□□□ -0.23
TPM1-207ENST00000403994 DNAJA3Q96EY1 480 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 COX4I2Q96KJ9 171 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 OR52B2Q96RD2 323 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 GSX2Q9BZM3 304 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 SDR39U1Q9NRG7 319 aaPredicted RBP13.61□□□□□ -0.23
TPM1-207ENST00000403994 ZIM2Q9NZV7 527 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 HDGFL3Q9Y3E1 203 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 RNF115Q9Y4L5 304 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 DSPPQ9NZW4 1301 aa13.61□□□□□ -0.23
TPM1-207ENST00000403994 ZNF716A6NP11 495 aa13.6□□□□□ -0.23
TPM1-207ENST00000403994 KLF11O14901 512 aa13.6□□□□□ -0.23
TPM1-207ENST00000403994 DNPH1O43598 174 aa13.6□□□□□ -0.23
TPM1-207ENST00000403994 KRT75O95678 551 aa13.6□□□□□ -0.23
TPM1-207ENST00000403994 NR2F1P10589 423 aa13.6□□□□□ -0.23
TPM1-207ENST00000403994 HOXB4P17483 251 aaPredicted RBP13.6□□□□□ -0.23
TPM1-207ENST00000403994 IDH2P48735 452 aaKnown RBP13.6□□□□□ -0.23
TPM1-207ENST00000403994 PTH2RP49190 550 aa13.6□□□□□ -0.23
TPM1-207ENST00000403994 GSTA3Q16772 222 aa13.6□□□□□ -0.23
TPM1-207ENST00000403994 KRTAP21-3Q3LHN1 58 aa13.6□□□□□ -0.23
TPM1-207ENST00000403994 GTDC1Q4AE62 458 aa13.6□□□□□ -0.23
TPM1-207ENST00000403994 PRSS57Q6UWY2 283 aa13.6□□□□□ -0.23
TPM1-207ENST00000403994 MSANTD1Q6ZTZ1 278 aa13.6□□□□□ -0.23
TPM1-207ENST00000403994 MTDHQ86UE4 582 aaKnown RBP13.6□□□□□ -0.23
TPM1-207ENST00000403994 ADGRG3Q86Y34 549 aa13.6□□□□□ -0.23
TPM1-207ENST00000403994 ZNF611Q8N823 705 aa13.6□□□□□ -0.23
TPM1-207ENST00000403994 OR9I1Q8NGQ6 314 aa13.6□□□□□ -0.23
TPM1-207ENST00000403994 PIGXQ8TBF5 258 aa13.6□□□□□ -0.23
TPM1-207ENST00000403994 PIWIL2Q8TC59 973 aaKnown RBP13.6□□□□□ -0.23
TPM1-207ENST00000403994 HSD17B8Q92506 261 aa13.6□□□□□ -0.23
TPM1-207ENST00000403994 ZHX1-C8orf76Q96EF9 292 aa13.6□□□□□ -0.23
TPM1-207ENST00000403994 Q96MF0 132 aa13.6□□□□□ -0.23
TPM1-207ENST00000403994 P2RX2Q9UBL9 471 aa13.6□□□□□ -0.23
TPM1-207ENST00000403994 TMED7-TICAM2A0A0A6YYA0 188 aa13.59□□□□□ -0.23
TPM1-207ENST00000403994 FAAHO00519 579 aa13.59□□□□□ -0.23
TPM1-207ENST00000403994 CLOCKO15516 846 aa13.59□□□□□ -0.23
TPM1-207ENST00000403994 DBIP07108 87 aaKnown RBP13.59□□□□□ -0.23
TPM1-207ENST00000403994 ETFAP13804 333 aa13.59□□□□□ -0.23
TPM1-207ENST00000403994 PAX1P15863 534 aa13.59□□□□□ -0.23
TPM1-207ENST00000403994 ADSLP30566 484 aaPredicted RBP13.59□□□□□ -0.23
TPM1-207ENST00000403994 MAGEA8P43361 318 aa13.59□□□□□ -0.23
TPM1-207ENST00000403994 HTR3AP46098 478 aa13.59□□□□□ -0.23
TPM1-207ENST00000403994 POLR2HP52434 150 aaKnown RBP13.59□□□□□ -0.23
TPM1-207ENST00000403994 EPS8Q12929 822 aa13.59□□□□□ -0.23
TPM1-207ENST00000403994 CAPRIN1Q14444 709 aaKnown RBP13.59□□□□□ -0.23
TPM1-207ENST00000403994 PDK3Q15120 406 aa13.59□□□□□ -0.23
TPM1-207ENST00000403994 STK11Q15831 433 aa13.59□□□□□ -0.23
TPM1-207ENST00000403994 NCMAPQ5T1S8 102 aa13.59□□□□□ -0.23
TPM1-207ENST00000403994 ZNF100Q8IYN0 542 aa13.59□□□□□ -0.23
TPM1-207ENST00000403994 TMEM171Q8WVE6 324 aa13.59□□□□□ -0.23
TPM1-207ENST00000403994 AKAP1Q92667 903 aaKnown RBP eCLIP13.59□□□□□ -0.23
TPM1-207ENST00000403994 PMM1Q92871 262 aa13.59□□□□□ -0.23
TPM1-207ENST00000403994 VPS33AQ96AX1 596 aa13.59□□□□□ -0.23
TPM1-207ENST00000403994 AURKBQ96GD4 344 aaPredicted RBP13.59□□□□□ -0.23
TPM1-207ENST00000403994 CXorf56Q9H5V9 222 aa13.59□□□□□ -0.23
TPM1-207ENST00000403994 OSGIN1Q9UJX0 560 aa13.59□□□□□ -0.23
TPM1-207ENST00000403994 TMED7Q9Y3B3 224 aa13.59□□□□□ -0.23
TPM1-207ENST00000403994 CSPG4Q6UVK1 2322 aa13.58□□□□□ -0.23
TPM1-207ENST00000403994 TMEM72A0PK05 275 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 CFAP73A6NFT4 308 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 H7C1Q1 480 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 UBDO15205 165 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 RAMP1O60894 148 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 CNOT4O95628 575 aaKnown RBP13.58□□□□□ -0.24
TPM1-207ENST00000403994 BCHEP06276 602 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 CD3EP07766 207 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 ZCCHC18P0CG32 403 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 UQCRBP14927 111 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 IL7RP16871 459 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 CCNA2P20248 432 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 IGHV1-2P23083 117 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 FKBP2P26885 142 aaKnown RBP13.58□□□□□ -0.24
TPM1-207ENST00000403994 TACR3P29371 465 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 SLC1A3P43003 542 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 CLK1P49759 484 aaKnown RBP13.58□□□□□ -0.24
TPM1-207ENST00000403994 SLC16A1P53985 500 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 BSPH1Q075Z2 132 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 GNA13Q14344 377 aa13.58□□□□□ -0.24
TPM1-207ENST00000403994 LIN52Q52LA3 116 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms