RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 KCNJ10P78508 379 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 SELENBP1Q13228 472 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 TESK1Q15569 626 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 TSC22D1Q15714 1073 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 PDSS1Q5T2R2 415 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 EEF1A1P5Q5VTE0 462 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZNF836Q6ZNA1 936 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 LRRC74BQ6ZQY2 392 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 PLEKHM3Q6ZWE6 761 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 FCRLAQ7L513 359 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 NUFIP2Q7Z417 695 aaKnown RBP5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 VRK2Q86Y07 508 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 FUNDC1Q8IVP5 155 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 TUSC5Q8IXB3 177 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 FAM71CQ8NEG0 241 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 OR6K3Q8NGY3 331 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZNF563Q8TA94 476 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 RNF128Q8TEB7 428 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 WDR60Q8WVS4 1066 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 CKAP2Q8WWK9 683 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 ST8SIA1Q92185 356 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 GTF2H4Q92759 462 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 REXO5Q96IC2 774 aaKnown RBP5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 GMPPAQ96IJ6 420 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 ITCHQ96J02 903 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 TRNT1Q96Q11 434 aaKnown RBP5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 MED18Q9BUE0 208 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 OR11A1Q9GZK7 315 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 PAIP1Q9H074 479 aaKnown RBP5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 RMND5AQ9H871 391 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 TPT1P8Q9HAU6 139 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 CTPS2Q9NRF8 586 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 POLE3Q9NRF9 147 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 CCM2LQ9NUG4 571 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 ACER3Q9NUN7 267 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 INTS9Q9NV88 658 aaKnown RBP5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 RLIMQ9NVW2 624 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 ARGLU1Q9NWB6 273 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 PAQR5Q9NXK6 330 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 C6orf203Q9P0P8 240 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 SLAMF8Q9P0V8 285 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 LIPT1Q9Y234 373 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 PCDHB14Q9Y5E9 798 aa5.14□□□□□ -1.59
HMGB1P20-201ENST00000402555 PLCE1Q9P212 2302 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 TMEM72A0PK05 275 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 GJE1A6NN92 205 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 DEFB108AA8MXU0 73 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 C16orf97H3BN30 126 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 CASKO14936 926 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 SMAD9O15198 467 aaKnown RBP5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 PRKD3O94806 890 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 TGDSO95455 350 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 THBDP07204 575 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 FESP07332 822 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 GUSBP08236 651 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 TFPTP0C1Z6 253 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 GKN3PP0CG01 181 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZCCHC18P0CG32 403 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 PRG2P13727 222 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 IL7RP16871 459 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 HOXB9P17482 250 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 RPS4Y1P22090 263 aaKnown RBP5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 EDNRAP25101 427 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 IDH2P48735 452 aaKnown RBP5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 DIO1P49895 249 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 LRRC74AQ0VAA2 488 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 SF3A3Q12874 501 aaKnown RBP eCLIP5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 AGKQ53H12 422 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 SYT14P1Q58G82 188 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 PAGE3Q5JUK9 113 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 TMEM201Q5SNT2 666 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 MRPL2Q5T653 305 aaKnown RBP5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 AP1ARQ63HQ0 302 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 ALKBH2Q6NS38 261 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 C3orf33Q6P1S2 294 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 STAC2Q6ZMT1 411 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 MSANTD1Q6ZTZ1 278 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 ADGRG3Q86Y34 549 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 WFDC8Q8IUA0 241 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 MSRB3Q8IXL7 192 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 C10orf111Q8N326 155 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 CLIP4Q8N3C7 705 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 ARFGAP2Q8N6H7 521 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 OR52P1PQ8NH57 321 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 SLC38A5Q8WUX1 472 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 TMEM234Q8WY98 164 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 MAL2Q969L2 176 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 CPNE4Q96A23 557 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 PIK3IP1Q96FE7 263 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 TMEM19Q96HH6 336 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 ARL5BQ96KC2 179 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 DACH2Q96NX9 599 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZNF300Q96RE9 604 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 SLC39A3Q9BRY0 314 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 CCDC28BQ9BUN5 200 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 CCDC106Q9BWC9 280 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 IKZF5Q9H5V7 419 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 PLEKHF2Q9H8W4 249 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms