RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 MTHFD2LQ9H903 347 aaPredicted RBP8.49□□□□□ -1.05
HPS4-203ENST00000402105 TMEM27Q9HBJ8 222 aa8.49□□□□□ -1.05
HPS4-203ENST00000402105 SDHAF2Q9NX18 166 aa8.49□□□□□ -1.05
HPS4-203ENST00000402105 CALML5Q9NZT1 146 aa8.49□□□□□ -1.05
HPS4-203ENST00000402105 CDV3Q9UKY7 258 aaKnown RBP8.49□□□□□ -1.05
HPS4-203ENST00000402105 BAIAP2Q9UQB8 552 aa8.49□□□□□ -1.05
HPS4-203ENST00000402105 RWDD3Q9Y3V2 267 aa8.49□□□□□ -1.05
HPS4-203ENST00000402105 ASCC3Q8N3C0 2202 aaKnown RBP8.49□□□□□ -1.05
HPS4-203ENST00000402105 SPEGQ15772 3267 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 A0A1B0GVI7 797 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 TRAPPC13A5PLN9 417 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 OTOL1A6NHN0 477 aaPredicted RBP8.48□□□□□ -1.05
HPS4-203ENST00000402105 BLOC1S5-TXNDC5H3BN57 136 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 SHOXO15266 292 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 IGHA1P01876 353 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 EPXP11678 715 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 F3P13726 295 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 CPMP14384 443 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 CEBPBP17676 345 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 SEC13P55735 322 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 ZP1P60852 638 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 SGCGQ13326 291 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 MLF2Q15773 248 aaPredicted RBP8.48□□□□□ -1.05
HPS4-203ENST00000402105 TMEM44Q2T9K0 475 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 FAM198BQ6UWH4 519 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 C17orf107Q6ZR85 190 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 NMNAT3Q96T66 252 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 PCBD2Q9H0N5 130 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 HEXA-AS1Q9H8Q6 139 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 PRDM7Q9NQW5 492 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 MRPS18AQ9NVS2 196 aaKnown RBP8.48□□□□□ -1.05
HPS4-203ENST00000402105 FBXL2Q9UKC9 423 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 EXOGQ9Y2C4 368 aaKnown RBP8.48□□□□□ -1.05
HPS4-203ENST00000402105 A0A1B0GTH9 108 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 OR2W5A6NFC9 320 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 DUXAA6NLW8 204 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 DOK2O60496 412 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 CLEC3AO75596 197 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 APEHP13798 732 aaKnown RBP8.48□□□□□ -1.05
HPS4-203ENST00000402105 PRKACAP17612 351 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 PSMB1P20618 241 aaKnown RBP8.48□□□□□ -1.05
HPS4-203ENST00000402105 TAGLNQ01995 201 aaKnown RBP8.48□□□□□ -1.05
HPS4-203ENST00000402105 ZNF85Q03923 595 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 LGALS3BPQ08380 585 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 RPE65Q16518 533 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 C4orf46Q504U0 113 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 METRNLQ641Q3 311 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 HEPHL1Q6MZM0 1159 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 LRRC25Q8N386 305 aaPredicted RBP8.48□□□□□ -1.05
HPS4-203ENST00000402105 OR2L5Q8NG80 312 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 FCAMRQ8WWV6 532 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 FGF11Q92914 225 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 DVL3Q92997 716 aaPredicted RBP8.48□□□□□ -1.05
HPS4-203ENST00000402105 TSSK2Q96PF2 358 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 ZNF649Q9BS31 505 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 ERVMER34-1Q9H9K5 563 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 SRA1Q9HD15 236 aaKnown RBP8.48□□□□□ -1.05
HPS4-203ENST00000402105 HRASLSQ9HDD0 168 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 POLMQ9NP87 494 aaPredicted RBP8.48□□□□□ -1.05
HPS4-203ENST00000402105 PFDN2Q9UHV9 154 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 ZMIZ1Q9ULJ6 1067 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 GPR34Q9UPC5 381 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 ALPK3Q96L96 1907 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 RANBP2P49792 3224 aaKnown RBP8.48□□□□□ -1.05
HPS4-203ENST00000402105 C17orf113A0A1B0GUU1 675 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 C4orf47A7E2U8 309 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 ARL6IP5O75915 188 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 DDX6P26196 483 aaKnown RBP eCLIP8.48□□□□□ -1.05
HPS4-203ENST00000402105 HTR2AP28223 471 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 FZD5Q13467 585 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 BTN2A1Q7KYR7 527 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 NRROSQ86YC3 692 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 HDDC3Q8N4P3 179 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 OR4K14Q8NGD5 310 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 OR5T3Q8NGG3 340 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 OR6M1Q8NGM8 313 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 OR14C36Q8NHC7 312 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 SYNPRQ8TBG9 265 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 ST8SIA4Q92187 359 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 OR1F2PQ96R84 312 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 ULBP3Q9BZM4 244 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 LIN7BQ9HAP6 207 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 TCF7L1Q9HCS4 588 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 SLC6A20Q9NP91 592 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.48□□□□□ -1.05
HPS4-203ENST00000402105 CA5BQ9Y2D0 317 aa8.48□□□□□ -1.05
HPS4-203ENST00000402105 KIAA0100Q14667 2235 aaKnown RBP8.48□□□□□ -1.05
HPS4-203ENST00000402105 TP53BP1Q12888 1972 aaPredicted RBP8.48□□□□□ -1.05
HPS4-203ENST00000402105 MEIKINA0A087WXM9 373 aa8.47□□□□□ -1.05
HPS4-203ENST00000402105 GXYLT2A0PJZ3 443 aa8.47□□□□□ -1.05
HPS4-203ENST00000402105 LINC00862A6NCI5 91 aa8.47□□□□□ -1.05
HPS4-203ENST00000402105 GOSR2O14653 212 aa8.47□□□□□ -1.05
HPS4-203ENST00000402105 CCR9P51686 369 aa8.47□□□□□ -1.05
HPS4-203ENST00000402105 ELAVL3Q14576 367 aaKnown RBP8.47□□□□□ -1.05
HPS4-203ENST00000402105 ELP2Q6IA86 826 aa8.47□□□□□ -1.05
HPS4-203ENST00000402105 MFSD12Q6NUT3 480 aa8.47□□□□□ -1.05
HPS4-203ENST00000402105 TMEM81Q6P7N7 255 aa8.47□□□□□ -1.05
HPS4-203ENST00000402105 KIAA1324Q6UXG2 1013 aaKnown RBP8.47□□□□□ -1.05
HPS4-203ENST00000402105 PARGQ86W56 976 aa8.47□□□□□ -1.05
HPS4-203ENST00000402105 TMPRSS12Q86WS5 348 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms