RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 TMED7Q9Y3B3 224 aa14.36□□□□□ -0.11
HMGA1-204ENST00000401473 ENPP4Q9Y6X5 453 aa14.36□□□□□ -0.11
HMGA1-204ENST00000401473 ADGRG4Q8IZF6 3080 aa14.36□□□□□ -0.11
HMGA1-204ENST00000401473 KIAA1549Q9HCM3 1950 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 DHRS12A0PJE2 317 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 ZC3H12DA2A288 527 aaKnown RBP14.35□□□□□ -0.11
HMGA1-204ENST00000401473 ZNF708P17019 499 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 SFTPDP35247 375 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 HTR3AP46098 478 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 SRYQ05066 204 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 EGR4Q05215 589 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 GXYLT1Q4G148 440 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 C1QL3Q5VWW1 255 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 GDF7Q7Z4P5 450 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 ZDHHC21Q8IVQ6 265 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 UBQLNLQ8IYU4 475 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 OR5M9Q8NGP3 310 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 SMPDL3BQ92485 455 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 ARL5BQ96KC2 179 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 PRSS27Q9BQR3 290 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 TRIM15Q9C019 465 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 RPS6KB2Q9UBS0 482 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 ACAD8Q9UKU7 415 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 SLC7A7Q9UM01 511 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 AURKCQ9UQB9 309 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 MED12LQ86YW9 2145 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 A0A087WUJ7 227 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 A0A0J9YW62 118 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 TMEM72A0PK05 275 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 TRAPPC13A5PLN9 417 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 OR14I1A6ND48 311 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 LINC01387J3KSC0 135 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 CPN1P15169 458 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 PTNP21246 168 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 CXCR1P25024 350 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 ELK4P28324 431 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 MAGEA2P43356 314 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 UQCRFS1P47985 274 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 TAS2R41P59536 307 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 KPNB1Q14974 876 aaKnown RBP14.35□□□□□ -0.11
HMGA1-204ENST00000401473 CTU2Q2VPK5 515 aaKnown RBP14.35□□□□□ -0.11
HMGA1-204ENST00000401473 TMEM176BQ3YBM2 270 aaPredicted RBP14.35□□□□□ -0.11
HMGA1-204ENST00000401473 P3H2Q8IVL5 708 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 NKAIN4Q8IVV8 208 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 SLC41A3Q96GZ6 507 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 PRRC1Q96M27 445 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 DENND2DQ9H6A0 471 aaPredicted RBP14.35□□□□□ -0.11
HMGA1-204ENST00000401473 PNPLA3Q9NST1 481 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 MAN2C1Q9NTJ4 1040 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 ZNF835Q9Y2P0 537 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 AP4B1Q9Y6B7 739 aa14.35□□□□□ -0.11
HMGA1-204ENST00000401473 IGKV1D-42A0A075B6H8 117 aa14.34□□□□□ -0.11
HMGA1-204ENST00000401473 CIB2O75838 187 aa14.34□□□□□ -0.11
HMGA1-204ENST00000401473 UMPSP11172 480 aa14.34□□□□□ -0.11
HMGA1-204ENST00000401473 RHCEP18577 417 aa14.34□□□□□ -0.11
HMGA1-204ENST00000401473 POU3F2P20265 443 aaPredicted RBP14.34□□□□□ -0.11
HMGA1-204ENST00000401473 ACTR3P61158 418 aa14.34□□□□□ -0.11
HMGA1-204ENST00000401473 LSM11P83369 360 aaKnown RBP eCLIP14.34□□□□□ -0.116e-9■■■■□ 22.3
HMGA1-204ENST00000401473 CHRNB3Q05901 458 aa14.34□□□□□ -0.11
HMGA1-204ENST00000401473 SELENBP1Q13228 472 aa14.34□□□□□ -0.11
HMGA1-204ENST00000401473 BCL2A1Q16548 175 aa14.34□□□□□ -0.11
HMGA1-204ENST00000401473 FAM98BQ52LJ0 330 aaKnown RBP14.34□□□□□ -0.11
HMGA1-204ENST00000401473 C3orf33Q6P1S2 294 aa14.34□□□□□ -0.11
HMGA1-204ENST00000401473 PIWIL3Q7Z3Z3 882 aaKnown RBP14.34□□□□□ -0.11
HMGA1-204ENST00000401473 RNF217Q8TC41 542 aa14.34□□□□□ -0.11
HMGA1-204ENST00000401473 SARAFQ96BY9 339 aa14.34□□□□□ -0.11
HMGA1-204ENST00000401473 CHID1Q9BWS9 393 aa14.34□□□□□ -0.11
HMGA1-204ENST00000401473 PRDM14Q9GZV8 571 aa14.34□□□□□ -0.11
HMGA1-204ENST00000401473 MAGIXQ9H6Y5 334 aa14.34□□□□□ -0.11
HMGA1-204ENST00000401473 NMNAT1Q9HAN9 279 aaPredicted RBP14.34□□□□□ -0.11
HMGA1-204ENST00000401473 SERINC1Q9NRX5 453 aa14.34□□□□□ -0.11
HMGA1-204ENST00000401473 CCM2LQ9NUG4 571 aaPredicted RBP14.34□□□□□ -0.11
HMGA1-204ENST00000401473 USP9XQ93008 2570 aaPredicted RBP14.34□□□□□ -0.11
HMGA1-204ENST00000401473 A0A1W2PNR3 127 aa14.33□□□□□ -0.11
HMGA1-204ENST00000401473 ADAMDEC1O15204 470 aa14.33□□□□□ -0.11
HMGA1-204ENST00000401473 SEC14L5O43304 696 aa14.33□□□□□ -0.11
HMGA1-204ENST00000401473 CHP2O43745 196 aa14.33□□□□□ -0.11
HMGA1-204ENST00000401473 SLC19A2O60779 497 aa14.33□□□□□ -0.11
HMGA1-204ENST00000401473 NPIPB7O75200 414 aa14.33□□□□□ -0.11
HMGA1-204ENST00000401473 OR5F1O95221 314 aa14.33□□□□□ -0.11
HMGA1-204ENST00000401473 FABP3P05413 133 aa14.33□□□□□ -0.11
HMGA1-204ENST00000401473 RAP2AP10114 183 aa14.33□□□□□ -0.11
HMGA1-204ENST00000401473 SYT14P1Q58G82 188 aa14.33□□□□□ -0.11
HMGA1-204ENST00000401473 PLXDC2Q6UX71 529 aa14.33□□□□□ -0.11
HMGA1-204ENST00000401473 GALNT11Q8NCW6 608 aa14.33□□□□□ -0.11
HMGA1-204ENST00000401473 ADGRG7Q96K78 797 aa14.33□□□□□ -0.11
HMGA1-204ENST00000401473 RAB3IPQ96QF0 476 aaPredicted RBP14.33□□□□□ -0.11
HMGA1-204ENST00000401473 ZNF426Q9BUY5 554 aa14.33□□□□□ -0.11
HMGA1-204ENST00000401473 C12orf10Q9HB07 376 aa14.33□□□□□ -0.11
HMGA1-204ENST00000401473 ALKBH4Q9NXW9 302 aa14.33□□□□□ -0.11
HMGA1-204ENST00000401473 KDM4EB2RXH2 506 aaPredicted RBP14.33□□□□□ -0.12
HMGA1-204ENST00000401473 ZNF208O43345 1280 aa14.33□□□□□ -0.12
HMGA1-204ENST00000401473 GPIP06744 558 aa14.33□□□□□ -0.12
HMGA1-204ENST00000401473 PNMTP11086 282 aa14.33□□□□□ -0.12
HMGA1-204ENST00000401473 PLA2G2AP14555 144 aa14.33□□□□□ -0.12
HMGA1-204ENST00000401473 GNLYP22749 145 aa14.33□□□□□ -0.12
HMGA1-204ENST00000401473 SWT1Q5T5J6 900 aaKnown RBP14.33□□□□□ -0.12
HMGA1-204ENST00000401473 DOLPP1Q86YN1 238 aa14.33□□□□□ -0.12
HMGA1-204ENST00000401473 PAPD5Q8NDF8 572 aaKnown RBP14.33□□□□□ -0.12
HMGA1-204ENST00000401473 FAM57AQ8TBR7 257 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms