RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 CBX1P83916 185 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 BSPH1Q075Z2 132 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 TAB1Q15750 504 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 GRAMD1BQ3KR37 738 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 MMEL1Q495T6 779 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 GTDC1Q4AE62 458 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 COQ5Q5HYK3 327 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 LRIF1Q5T3J3 769 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 SAXO2Q658L1 398 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 FAM91A1Q658Y4 838 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 REP15Q6BDI9 236 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 MFSD12Q6NUT3 480 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 BHLHB9Q6PI77 547 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 C6orf120Q7Z4R8 191 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 MISPQ8IVT2 679 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 CPNE4Q96A23 557 aaPredicted RBP12.72□□□□□ -0.37
RAB1A-201ENST00000398529 RADILQ96JH8 1075 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 SLC35G5Q96KT7 338 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 KLHL15Q96M94 604 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 RNF145Q96MT1 663 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 LMF2Q9BU23 707 aaKnown RBP12.72□□□□□ -0.37
RAB1A-201ENST00000398529 GRIP2Q9C0E4 1043 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 GP6Q9HCN6 339 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 EQTNQ9NQ60 294 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 GPATCH2Q9NW75 528 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 SLAMF8Q9P0V8 285 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 PCDHB14Q9Y5E9 798 aa12.72□□□□□ -0.37
RAB1A-201ENST00000398529 SCDO00767 359 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 MRASO14807 208 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 PRKD3O94806 890 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 ADAP00813 363 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 HMGN2P05204 90 aaKnown RBP12.71□□□□□ -0.37
RAB1A-201ENST00000398529 CHI3L1P36222 383 aaPredicted RBP12.71□□□□□ -0.37
RAB1A-201ENST00000398529 ITGADQ13349 1161 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 NFYCQ13952 458 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 LASP1Q14847 261 aaKnown RBP12.71□□□□□ -0.37
RAB1A-201ENST00000398529 TSC22D1Q15714 1073 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 EXOSC6Q5RKV6 272 aaKnown RBP12.71□□□□□ -0.37
RAB1A-201ENST00000398529 C6orf52Q5T4I8 152 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 ZCCHC12Q6PEW1 402 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 DLEU7Q6UYE1 221 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 BHLHA15Q7RTS1 189 aaPredicted RBP12.71□□□□□ -0.37
RAB1A-201ENST00000398529 DHDDSQ86SQ9 333 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 GABRG1Q8N1C3 465 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 FITM2Q8N6M3 262 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 CDRT4Q8N9R6 151 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 KBTBD8Q8NFY9 601 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 ZFP90Q8TF47 636 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 ROBO4Q8WZ75 1007 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 HOXB13Q92826 284 aaPredicted RBP12.71□□□□□ -0.37
RAB1A-201ENST00000398529 NEUROG1Q92886 237 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 NEURL3Q96EH8 262 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 C16orf58Q96GQ5 468 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 ADGRG7Q96K78 797 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 TRAF4Q9BUZ4 470 aaPredicted RBP12.71□□□□□ -0.37
RAB1A-201ENST00000398529 ACTRT3Q9BYD9 372 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 SHARPINQ9H0F6 387 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 KLHL13Q9P2N7 655 aa12.71□□□□□ -0.37
RAB1A-201ENST00000398529 GDF2Q9UK05 429 aaPredicted RBP12.71□□□□□ -0.37
RAB1A-201ENST00000398529 TRBV5-3A0A0A0MS03 114 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 A0A0J9YW62 118 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 ALG1L2C9J202 215 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 GCM2O75603 506 aaPredicted RBP12.7□□□□□ -0.38
RAB1A-201ENST00000398529 KRT75O95678 551 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 C1QCP02747 245 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 YES1P07947 543 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 KRT16P08779 473 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 ACP2P11117 423 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 BMP4P12644 408 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 MATN1P21941 496 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 SFTPDP35247 375 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 MAP3K8P41279 467 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 PPA1Q15181 289 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 RAB35Q15286 201 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 STK11Q15831 433 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 TMEM249Q2WGJ8 235 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 PGGHGQ32M88 737 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 PLPPR5Q32ZL2 321 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 CDC73Q6P1J9 531 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 TFAP2EQ6VUC0 442 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 DNM1P46Q6ZS02 220 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 TUSC5Q8IXB3 177 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 MSRB3Q8IXL7 192 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 DEPDC4Q8N2C3 294 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 SLC43A2Q8N370 569 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 PCYOX1LQ8NBM8 494 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 FBXO30Q8TB52 745 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 PIK3R3Q92569 461 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 RCN3Q96D15 328 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 CMTM5Q96DZ9 223 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 AURKBQ96GD4 344 aaPredicted RBP12.7□□□□□ -0.38
RAB1A-201ENST00000398529 SH3YL1Q96HL8 342 aaPredicted RBP12.7□□□□□ -0.38
RAB1A-201ENST00000398529 TNFRSF13CQ96RJ3 184 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 TRIM2Q9C040 744 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 SERHL2Q9H4I8 314 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 TPT1P8Q9HAU6 139 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 MED17Q9NVC6 651 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 ARL8BQ9NVJ2 186 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 SLC25A37Q9NYZ2 338 aa12.7□□□□□ -0.38
RAB1A-201ENST00000398529 VAPAQ9P0L0 249 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms