RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 GJD3Q8N144 294 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 COX14Q96I36 57 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 C6orf106Q9H6K1 298 aaPredicted RBP14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 BEX1Q9HBH7 125 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 KLHL28Q9NXS3 571 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 DUX4Q9UBX2 424 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 GNB5O14775 395 aa14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 EMC8O43402 210 aa14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 RASGRP1O95267 797 aa14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 IFNA4P05014 189 aa14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 FABP1P07148 127 aa14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 GIPP09681 153 aaPredicted RBP14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 PPP3CBP16298 524 aa14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 CSNK2A2P19784 350 aaPredicted RBP14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 GDI2P50395 445 aaKnown RBP14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 PRDX1Q06830 199 aaKnown RBP14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 DECR1Q16698 335 aa14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 CORO6Q6QEF8 472 aa14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 MBOAT2Q6ZWT7 520 aa14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 LILRB2Q8N423 598 aa14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 ACBD7Q8N6N7 88 aa14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 ZNF707Q96C28 371 aaPredicted RBP14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 MS4A6EQ96DS6 147 aa14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 C20orf85Q9H1P6 137 aa14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 NPDC1Q9NQX5 325 aaPredicted RBP14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 TINAGQ9UJW2 476 aa14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 SLC7A7Q9UM01 511 aa14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 EDARQ9UNE0 448 aa14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 ERVK-19Q9WJR5 959 aa14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.79□□□□□ -0.04
CHMP1A-201ENST00000397901 REM1O75628 298 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 CD3GP09693 182 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 GABRA1P14867 456 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 RORAP35398 523 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 RAP2BP61225 183 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 CDK3Q00526 305 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 HNRNPA1L2Q32P51 320 aaKnown RBP14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 SPICQ8N5J4 248 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 OR1M1Q8NGA1 313 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 OR10H4Q8NGA5 316 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 OR2A1Q8NGT9 310 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 HCAR1Q9BXC0 346 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 UBQLN3Q9H347 655 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 MED17Q9NVC6 651 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 PIPOXQ9P0Z9 390 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 MGAT4CQ9UBM8 478 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 CA5BQ9Y2D0 317 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 E9PI62 339 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 KLF4O43474 513 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 SUSD5O60279 629 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 HPP00738 406 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 MRPL3P09001 348 aaKnown RBP14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 SLC16A1P53985 500 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 ERVK-25P63136 954 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 SLC3A1Q07837 685 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 MLF2Q15773 248 aaPredicted RBP14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 METTL11BQ5VVY1 283 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 ABHD17CQ6PCB6 329 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 TMIEQ8NEW7 156 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 OR5M9Q8NGP3 310 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 SMAP2Q8WU79 429 aaPredicted RBP14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 ELP4Q96EB1 424 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 DMRTA2Q96SC8 542 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 INSM2Q96T92 566 aaPredicted RBP14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 DPH1Q9BZG8 443 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 ZNF768Q9H5H4 540 aaKnown RBP14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 PRDM7Q9NQW5 492 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 KLHL1Q9NR64 748 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 EPHA6Q9UF33 1036 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 OR1A2Q9Y585 309 aa14.78□□□□□ -0.04
CHMP1A-201ENST00000397901 LINC01553A4QN01 128 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 J3QRE1 110 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 MT-ND4P03905 459 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 ZGLP1P0C6A0 271 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 F3P13726 295 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 RAB3BP20337 219 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 THBS2P35442 1172 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 MMP15P51511 669 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 MC2RQ01718 297 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 SNTB2Q13425 540 aaKnown RBP14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 AGERQ15109 404 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 SFXN4Q6P4A7 337 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 Q6ZTK2 550 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 TMUB2Q71RG4 321 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 TMEM151BQ8IW70 566 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 FAM71CQ8NEG0 241 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 NR4A3Q92570 626 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 SLC35A4Q96G79 324 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 TIMP4Q99727 224 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 ENKD1Q9H0I2 346 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 SYNPO2LQ9H987 977 aa14.77□□□□□ -0.04
CHMP1A-201ENST00000397901 EDDM13A0A1B0GTR0 161 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 DAPL1A0PJW8 107 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 SYNDIG1LA6NDD5 238 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 IGLON5A6NGN9 336 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 PRR23D1E9PI22 279 aaPredicted RBP14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 GALR3O60755 368 aaPredicted RBP14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 FZD7O75084 574 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 PRR23D2P0DMB1 279 aaPredicted RBP14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 DRD5P21918 477 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms