RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 LRRC3CA6NJW4 275 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 SP1P08047 785 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 GP1BBP13224 206 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 PRKCAP17252 672 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 RBM34P42696 430 aaKnown RBP15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 MASP1P48740 699 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 UGT2B15P54855 530 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 MLLT10P55197 1068 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 GPR85P60893 370 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 ARG2P78540 354 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 PLPPR5Q32ZL2 321 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 KDM4DQ6B0I6 523 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 PGBD2Q6P3X8 592 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 ZNF730Q6ZMV8 503 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 MBOAT2Q6ZWT7 520 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 RNF217Q8TC41 542 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 TMEM239Q8WW34 195 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 TMEM234Q8WY98 164 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 C1GALT1C1Q96EU7 318 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 HS6ST2Q96MM7 605 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 GNRHR2Q96P88 292 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 NPAS1Q99742 590 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 TUBA8Q9NY65 449 aaPredicted RBP15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 SELENONQ9NZV5 590 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 PCDHGA9Q9Y5G4 932 aaKnown RBP15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 C7orf72A4D263 438 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 H0YJX3 145 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 PIP5K1CO60331 668 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 NME2P1O60361 137 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 OR10H3O60404 316 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 GASTP01350 101 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 PNMTP11086 282 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 ANXA8P13928 327 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 PTNP21246 168 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 NME2P22392 152 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 TACR3P29371 465 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 FOXO1Q12778 655 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 NADK2Q4G0N4 442 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 SLC25A53Q5H9E4 307 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 SLC25A25Q6KCM7 469 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 GRINAQ7Z429 371 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 RNF113BQ8IZP6 322 aaKnown RBP15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 ATG16L2Q8NAA4 619 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 AQP11Q8NBQ7 271 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 OR2M7Q8NG81 312 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 MIB2Q96AX9 1013 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 SCMH1Q96GD3 660 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 NIPSNAP1Q9BPW8 284 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 FAM173AQ9BQD7 235 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 PTGES2Q9H7Z7 377 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 OSGIN1Q9UJX0 560 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 MGAT4BQ9UQ53 548 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 VDAC3Q9Y277 283 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 KLF13Q9Y2Y9 288 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 CSAG2Q9Y5P2 127 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 IGKV1D-42A0A075B6H8 117 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 CLEC18AA5D8T8 446 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 ELOA3DA6NLF2 546 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 OMPP47874 163 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 TNFSF10P50591 281 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 ZNF41P51814 821 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 POLR2HP52434 150 aaKnown RBP15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 FOXF1Q12946 379 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 ELOA3BQ3SY89 546 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 C1orf94Q6P1W5 598 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 CLEC18BQ6UXF7 455 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 ZER1Q7Z7L7 766 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 SULF2Q8IWU5 870 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 NRMQ8IXM6 262 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 CLEC18CQ8NCF0 446 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 ELOA3Q8NG57 546 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 JSRP1Q96MG2 331 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 DGCR6LQ9BY27 220 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.34■□□□□ 0.052e-7■■■■■ 28.9
TSPAN4-205ENST00000397406 MEPEQ9NQ76 525 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 KLHL1Q9NR64 748 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 KIF17Q9P2E2 1029 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 PCDHGB6Q9Y5F9 930 aa15.34■□□□□ 0.05
TSPAN4-205ENST00000397406 A0A087WZY1 265 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 MITFO75030 526 aaPredicted RBP15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 CBR3O75828 277 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 ADAP00813 363 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 CD46P15529 392 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 IGFBP5P24593 272 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 HTR3AP46098 478 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 DSCR4P56555 118 aaPredicted RBP15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 MERTKQ12866 999 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 TTC33Q6PID6 262 aaPredicted RBP15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 RRM2BQ7LG56 351 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 GALNTL5Q7Z4T8 443 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 ADGRG3Q86Y34 549 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 TEX19Q8NA77 164 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 Q8NA96 180 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 PFN4Q8NHR9 129 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 PIGXQ8TBF5 258 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 POC1BQ8TC44 478 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 MRGPRX4Q96LA9 322 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 C5orf34Q96MH7 638 aa15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 ZNF184Q99676 751 aaPredicted RBP15.33■□□□□ 0.04
TSPAN4-205ENST00000397406 GPA33Q99795 319 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms