RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 RAD52P43351 418 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 CCR9P51686 369 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 OC90Q02509 493 aaPredicted RBP13.62□□□□□ -0.23
CCNF-202ENST00000397066 ZNF85Q03923 595 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 POU4F2Q12837 409 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 SLC51BQ86UW2 128 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 RNF113BQ8IZP6 322 aaKnown RBP13.62□□□□□ -0.23
CCNF-202ENST00000397066 SMIM4Q8WVI0 70 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 HSPA12BQ96MM6 686 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 RNF208Q9H0X6 261 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 ADGRL4Q9HBW9 690 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 HRASLSQ9HDD0 168 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 NANSQ9NR45 359 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 MBNL1Q9NR56 388 aaKnown RBP13.62□□□□□ -0.23
CCNF-202ENST00000397066 CDK2AP1O14519 115 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 B3GALT2O43825 422 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 ATP1B1P05026 303 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 RRASP10301 218 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 GABRA3P34903 492 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 ACTA2P62736 377 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 ACTG2P63267 376 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 MLF2Q15773 248 aaPredicted RBP13.62□□□□□ -0.23
CCNF-202ENST00000397066 TMEM52BQ4KMG9 183 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 TRMT12Q53H54 448 aaKnown RBP13.62□□□□□ -0.23
CCNF-202ENST00000397066 Q6ZTK2 550 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 SSX6Q7RTT6 188 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 ASPGQ86U10 573 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 OR2L8Q8NGY9 312 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 HEXA-AS1Q9H8Q6 139 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 TCF7L1Q9HCS4 588 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 NOX4Q9NPH5 578 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 SPACA6W5XKT8 324 aa13.62□□□□□ -0.23
CCNF-202ENST00000397066 ZIC2O95409 532 aaPredicted RBP13.61□□□□□ -0.23
CCNF-202ENST00000397066 ERGP11308 486 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 SOX2P48431 317 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 ERVFC1P60507 584 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 GRAMD2AQ8IUY3 354 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 SLC35F2Q8IXU6 374 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 SAMD14Q8IZD0 417 aaPredicted RBP13.61□□□□□ -0.23
CCNF-202ENST00000397066 HGDQ93099 445 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 RADILQ96JH8 1075 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 ARL6Q9H0F7 186 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 KLK11Q9UBX7 282 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 CISD3P0C7P0 127 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 NAT1P18440 290 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 ANXA7P20073 488 aaKnown RBP13.61□□□□□ -0.23
CCNF-202ENST00000397066 KIAA1024LP59773 190 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 DYRK1AQ13627 763 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 HTR4Q13639 388 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 ARHGAP11AQ6P4F7 1023 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 ZC3H14Q6PJT7 736 aaKnown RBP13.61□□□□□ -0.23
CCNF-202ENST00000397066 OR51Q1Q8NH59 317 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 OR10G6Q8NH81 332 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 MARVELD3Q96A59 401 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 PTCHD1Q96NR3 888 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 NRIP3Q9NQ35 241 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 A0A0G2JK05 382 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 hCG_1807616A0A1W2PRN6 198 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 LILRB3O75022 631 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 PTHLHP12272 177 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 AK4P27144 223 aaPredicted RBP13.61□□□□□ -0.23
CCNF-202ENST00000397066 CAPZA2P47755 286 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 WDR88Q6ZMY6 472 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 PRSS42Q7Z5A4 293 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 SFTPA1Q8IWL2 248 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 TMEFF1Q8IYR6 380 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 SDHAF2Q9NX18 166 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 ZMIZ1Q9ULJ6 1067 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 STON1Q9Y6Q2 735 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 FAM171A2A8MVW0 826 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 KHNYNO15037 678 aaKnown RBP13.61□□□□□ -0.23
CCNF-202ENST00000397066 KLF4O43474 513 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 LDB3O75112 727 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 KDM4BO94953 1096 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 ACSM4P0C7M7 580 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 NFYAP23511 347 aaPredicted RBP13.61□□□□□ -0.23
CCNF-202ENST00000397066 ERVK-21P61565 698 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 ARSKQ6UWY0 536 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 HDDC3Q8N4P3 179 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 RFLNBQ8N5W9 214 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 SYNPRQ8TBG9 265 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 TNFAIP8L1Q8WVP5 186 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 JAM3Q9BX67 310 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 LMAN2LQ9H0V9 348 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 IER3IP1Q9Y5U9 82 aa13.61□□□□□ -0.23
CCNF-202ENST00000397066 SCN3AQ9NY46 2000 aa13.6□□□□□ -0.23
CCNF-202ENST00000397066 RP2O75695 350 aa13.6□□□□□ -0.23
CCNF-202ENST00000397066 UGT2B7P16662 529 aa13.6□□□□□ -0.23
CCNF-202ENST00000397066 HTR2AP28223 471 aa13.6□□□□□ -0.23
CCNF-202ENST00000397066 FZD5Q13467 585 aa13.6□□□□□ -0.23
CCNF-202ENST00000397066 ARHGAP11BQ3KRB8 267 aa13.6□□□□□ -0.23
CCNF-202ENST00000397066 DMKNQ6E0U4 476 aaPredicted RBP13.6□□□□□ -0.23
CCNF-202ENST00000397066 MRM1Q6IN84 353 aaKnown RBP13.6□□□□□ -0.23
CCNF-202ENST00000397066 ZNF613Q6PF04 617 aa13.6□□□□□ -0.23
CCNF-202ENST00000397066 PSRC1Q6PGN9 363 aaPredicted RBP13.6□□□□□ -0.23
CCNF-202ENST00000397066 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.6□□□□□ -0.23
CCNF-202ENST00000397066 ZBTB44Q8NCP5 570 aa13.6□□□□□ -0.23
CCNF-202ENST00000397066 PMEPA1Q969W9 287 aa13.6□□□□□ -0.23
CCNF-202ENST00000397066 POT1Q9NUX5 634 aa13.6□□□□□ -0.23
CCNF-202ENST00000397066 CES1P1Q9UKY3 287 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms