RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 MAKP20794 623 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 CHN2P52757 468 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 NUP107P57740 925 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 CDK5Q00535 292 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 SRSF6Q13247 344 aaKnown RBP12.35□□□□□ -0.43
MCF2L-209ENST00000397036 PLPPR5Q32ZL2 321 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 SLX4IPQ5VYV7 408 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 OR5M10Q6IEU7 315 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 IGFL2Q6UWQ7 119 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 ZNF620Q6ZNG0 422 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 MDGA2Q7Z553 956 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 DEPDC4Q8N2C3 294 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 OR4K17Q8NGC6 315 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 PFN4Q8NHR9 129 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 ZBTB8AQ96BR9 441 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 SGTBQ96EQ0 304 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 ZNF552Q9H707 407 aaPredicted RBP12.35□□□□□ -0.43
MCF2L-209ENST00000397036 SLC25A19Q9HC21 320 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 C20orf141Q9NUB4 165 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 CDH10Q9Y6N8 788 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 ACACAQ13085 2346 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 SPTBN4Q9H254 2564 aa12.34□□□□□ -0.43
MCF2L-209ENST00000397036 TMED7-TICAM2A0A0A6YYA0 188 aa12.34□□□□□ -0.43
MCF2L-209ENST00000397036 C2orf72A6NCS6 295 aa12.34□□□□□ -0.43
MCF2L-209ENST00000397036 UNC119BA6NIH7 251 aa12.34□□□□□ -0.43
MCF2L-209ENST00000397036 C17orf51A8MQB3 221 aa12.34□□□□□ -0.43
MCF2L-209ENST00000397036 A8MVM7 634 aa12.34□□□□□ -0.43
MCF2L-209ENST00000397036 FAM47E-STBD1D6RA91 191 aa12.34□□□□□ -0.43
MCF2L-209ENST00000397036 CDC42EP2O14613 210 aa12.34□□□□□ -0.43
MCF2L-209ENST00000397036 TLX3O43711 291 aaPredicted RBP12.34□□□□□ -0.43
MCF2L-209ENST00000397036 PIP5K1CO60331 668 aa12.34□□□□□ -0.43
MCF2L-209ENST00000397036 MPZL2O60487 215 aa12.34□□□□□ -0.43
MCF2L-209ENST00000397036 HCN1O60741 890 aa12.34□□□□□ -0.43
MCF2L-209ENST00000397036 CLK1P49759 484 aaKnown RBP12.34□□□□□ -0.43
MCF2L-209ENST00000397036 ZNF41P51814 821 aaPredicted RBP12.34□□□□□ -0.43
MCF2L-209ENST00000397036 DSCR4P56555 118 aaPredicted RBP12.34□□□□□ -0.43
MCF2L-209ENST00000397036 OC90Q02509 493 aaPredicted RBP12.34□□□□□ -0.43
MCF2L-209ENST00000397036 EGR4Q05215 589 aa12.34□□□□□ -0.43
MCF2L-209ENST00000397036 CRYZQ08257 329 aaKnown RBP12.34□□□□□ -0.43
MCF2L-209ENST00000397036 RAPSNQ13702 412 aa12.34□□□□□ -0.43
MCF2L-209ENST00000397036 PRAMEF20Q5VT98 475 aa12.34□□□□□ -0.43
MCF2L-209ENST00000397036 BROXQ5VW32 411 aa12.34□□□□□ -0.43
MCF2L-209ENST00000397036 OR1J4Q8NGS1 313 aa12.34□□□□□ -0.43
MCF2L-209ENST00000397036 POTEKPQ9BYX7 375 aa12.34□□□□□ -0.43
MCF2L-209ENST00000397036 SIGLEC7Q9Y286 467 aa12.34□□□□□ -0.43
MCF2L-209ENST00000397036 TMED7Q9Y3B3 224 aa12.34□□□□□ -0.43
MCF2L-209ENST00000397036 TRAV36DV7A0A075B6V5 113 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 MAGEA13PA6NCF6 341 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 OR5H15A6NDH6 313 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 ENO4A6NNW6 628 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 EFCAB9A8MZ26 197 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 KLK10O43240 276 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 OR2T1O43869 369 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 FZD7O75084 574 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 OR7A10O76100 309 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 CLIC3O95833 236 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 WDPCPO95876 746 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 MT-ATP6P00846 226 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 PRKAR1AP10644 381 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 GPR4P46093 362 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 CDC42P60953 191 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 CXCR4P61073 352 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 CSNK2BP67870 215 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 TMEM44Q2T9K0 475 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 ZBED5Q49AG3 693 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 C12orf73Q69YU5 71 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 ARSKQ6UWY0 536 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 KIF18BQ86Y91 864 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 GTPBP8Q8N3Z3 284 aaPredicted RBP12.33□□□□□ -0.44
MCF2L-209ENST00000397036 MDS2Q8NDY4 140 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 RHOXF1Q8NHV9 184 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 WDR70Q9NW82 654 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 FBXL2Q9UKC9 423 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 ZNF337Q9Y3M9 751 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 HRH3Q9Y5N1 445 aa12.33□□□□□ -0.44
MCF2L-209ENST00000397036 TRIM64A6NGJ6 449 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 H3BN98 237 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 SUSD5O60279 629 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 SLC25A12O75746 678 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 TNFAIP8O95379 198 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 TSPAN19P0C672 248 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 FUT1P19526 365 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 SPINK2P20155 84 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 MASP1P48740 699 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 SMSP52788 366 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 EFNB1P98172 346 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 FOXO1Q12778 655 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 FHL1Q13642 323 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 MFSD13AQ14CX5 517 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 OR1C1Q15619 314 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 ZNF74Q16587 644 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 SLC25A30Q5SVS4 291 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 SLC27A4Q6P1M0 643 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 SLC46A3Q7Z3Q1 461 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 CCDC71Q8IV32 467 aaPredicted RBP12.32□□□□□ -0.44
MCF2L-209ENST00000397036 TEX47Q8TBZ9 253 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 HDAC2Q92769 488 aaKnown RBP12.32□□□□□ -0.44
MCF2L-209ENST00000397036 FAM173AQ9BQD7 235 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 TEX12Q9BXU0 123 aa12.32□□□□□ -0.44
MCF2L-209ENST00000397036 ZNF696Q9H7X3 374 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms