RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SLC19A2O60779 497 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 KHDRBS3O75525 346 aaKnown RBP4.32□□□□□ -1.72
GABPB1-204ENST00000396464 ADAP1O75689 374 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 SC5DO75845 299 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 ATP5LO75964 103 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 JTBO76095 146 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 SEMA3DO95025 777 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 MMP1P03956 469 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 ALDOBP05062 364 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 FAM106CPP0CH98 169 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 MYOD1P15172 320 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 GM2AP17900 193 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 BGNP21810 368 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 IDSP22304 550 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 GCAP28676 217 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 EPHX2P34913 555 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 CSNK1DP48730 415 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 PGFP49763 221 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 DNA2P51530 1060 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 BACE1P56817 501 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 OR1D5P58170 312 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 BTG1P62324 171 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 CDR2Q01850 454 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 IFFO1Q0D2I5 559 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 SLC22A6Q4U2R8 563 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 TMEM35AQ53FP2 167 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 UTF1Q5T230 341 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 DDI2Q5TDH0 399 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 HHATQ5VTY9 493 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 C1orf189Q5VU69 101 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 PRR5LQ6MZQ0 368 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 SLC25A47Q6Q0C1 308 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 LRRC31Q6UY01 552 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 HACD2Q6Y1H2 254 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 CYS1Q717R9 158 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 CTU1Q7Z7A3 348 aaKnown RBP4.32□□□□□ -1.72
GABPB1-204ENST00000396464 ZNF100Q8IYN0 542 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 JAGN1Q8N5M9 183 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 OR1J1Q8NGS3 322 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 TMEM239Q8WW34 195 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 DDB2Q92466 427 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.32□□□□□ -1.72
GABPB1-204ENST00000396464 OPTNQ96CV9 577 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 RNF170Q96K19 258 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 C9orf72Q96LT7 481 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 TIMP4Q99727 224 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 ULBP2Q9BZM5 246 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 UCK2Q9BZX2 261 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 LAT2Q9GZY6 243 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 OR51M1Q9H341 326 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 PELI2Q9HAT8 420 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 ZC4H2Q9NQZ6 224 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 ELOVL2Q9NXB9 296 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 ABCD2Q9UBJ2 740 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 ASIC3Q9UHC3 531 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 KIF25Q9UIL4 384 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 LNPEPQ9UIQ6 1025 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 EIF3LQ9Y262 564 aaKnown RBP4.32□□□□□ -1.72
GABPB1-204ENST00000396464 AMDHD2Q9Y303 409 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 ARHGEF17Q96PE2 2063 aaPredicted RBP4.32□□□□□ -1.72
GABPB1-204ENST00000396464 SYNJ1O43426 1573 aa4.32□□□□□ -1.72
GABPB1-204ENST00000396464 PDS5AQ29RF7 1337 aaKnown RBP4.31□□□□□ -1.72
GABPB1-204ENST00000396464 MAP3K15Q6ZN16 1313 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 TTC21AQ8NDW8 1320 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 A0A0G2JNG1 304 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 LRIT2A6NDA9 550 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 GOLGA8JA6NMD2 632 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 ERI2A8K979 691 aaKnown RBP4.31□□□□□ -1.72
GABPB1-204ENST00000396464 CENPXA8MT69 81 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 GOLGA8KD6RF30 607 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 E7ESA3 106 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 E7EWF7 191 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 LIN7AO14910 233 aaPredicted RBP4.31□□□□□ -1.72
GABPB1-204ENST00000396464 TFECO14948 347 aaPredicted RBP4.31□□□□□ -1.72
GABPB1-204ENST00000396464 HSBP1O75506 76 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 NSA2O95478 260 aaKnown RBP4.31□□□□□ -1.72
GABPB1-204ENST00000396464 HLA-HP01893 362 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 PRKCGP05129 697 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 KRT7P08729 469 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 NHLRC4P0CG21 123 aaPredicted RBP4.31□□□□□ -1.72
GABPB1-204ENST00000396464 PGAM1P18669 254 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 NPR2P20594 1047 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 HTR2CP28335 458 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 PRKAR2BP31323 418 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 ACTR1BP42025 376 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 ACTBP60709 375 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 UBE2MP61081 183 aaKnown RBP4.31□□□□□ -1.72
GABPB1-204ENST00000396464 SEC61A1P61619 476 aaKnown RBP4.31□□□□□ -1.72
GABPB1-204ENST00000396464 ACTA2P62736 377 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 ACTG1P63261 375 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 ACTG2P63267 376 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 ACTC1P68032 377 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 ACTA1P68133 377 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 RGS1Q08116 209 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 KIR2DS5Q14953 304 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 UBE2V2Q15819 145 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 HAGHQ16775 308 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 ISXQ2M1V0 245 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 TTMPQ5BVD1 217 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 XKR6Q5GH73 641 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms